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SCNpilot_expt_300_bf_scaffold_1186_20

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 9758..10498

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S5 n=1 Tax=Sphingomonas sp. S17 RepID=F3X0I3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 84.1
  • Coverage: 246.0
  • Bit_score: 398
  • Evalue 6.70e-108
  • rbh
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sp similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 246.0
  • Bit_score: 398
  • Evalue 9.40e-108
rpsE; 30S ribosomal protein S5 similarity KEGG
DB: KEGG
  • Identity: 84.8
  • Coverage: 250.0
  • Bit_score: 390
  • Evalue 3.00e-106

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGGCTGACGAGAACAACACCGAGGTTCAGGCCACCACGGCCGCTCCCGAGGCGGCGGCGCCGGCCAGTGCCGGCGAGGCGCCCCGCGGTCGCGGCGCGCGTGGCGGCCGTGGCGGTGGCGGTGGCGGCGATCGCGGCCGTGGCGGCCGTGACGGCAACCGCGGTCGTCGCGACGACCGTCGCAACAACAACGAGGATGGTGGCGAGGAGCTGATCGAGAAGCTCGTCCACATCAACCGCGTGTCCAAGACCGTGAAGGGCGGCAAGCGCTTCGGCTTTGCGGCGCTGGTCGTCGTGGGTGACGGGAAGGGCCGCGTCGGCTTCGGCCACGGCAAGGCCCGCGAGGTGCCGGAAGCCATTTCGAAGGCGACCGCCTCGGCCAAGAAGCACATGGTCCGCGTGCCGCTGAAGGAAGGCCGCACGCTGCATCACGACGGCAACGGCCATTTCGGCGCCGGCCGCGTCACCGTCCGCTCGGCGCCGCAGGGCACCGGCATCATCGCGGGCGGCCCGATGCGCGCCGTCTTCGAGAGCCTGGGCGTGCATGATGTGGTGACCAAGTCGGTCGGCACGTCGAACCCGTACAACATGATCCGCGCCACCTTCGAGGCGCTGGGCAGCCAGACTTCGCCGAAGTCGGTCGCGCAGCGTCGTGGCAAGAAGATCGCCGACCTGCTCGGCCGCGGCCATGGCGCTGACGCGCAGGCCGCCGCTGCCGAAGCGGCGGCCGTCACGGAGTAA
PROTEIN sequence
Length: 247
MADENNTEVQATTAAPEAAAPASAGEAPRGRGARGGRGGGGGGDRGRGGRDGNRGRRDDRRNNNEDGGEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATASAKKHMVRVPLKEGRTLHHDGNGHFGAGRVTVRSAPQGTGIIAGGPMRAVFESLGVHDVVTKSVGTSNPYNMIRATFEALGSQTSPKSVAQRRGKKIADLLGRGHGADAQAAAAEAAAVTE*