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SCNpilot_expt_300_bf_scaffold_1529_2

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 108..893

Top 3 Functional Annotations

Value Algorithm Source
Arabinose efflux permease family protein n=1 Tax=Caulobacter sp. AP07 RepID=J3AKP0_9CAUL similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 209.0
  • Bit_score: 246
  • Evalue 3.50e-62
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJL33286.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 209.0
  • Bit_score: 246
  • Evalue 4.90e-62
putative MFS transporter similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 211.0
  • Bit_score: 232
  • Evalue 1.10e-58

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Taxonomy

Caulobacter sp. AP07 → Caulobacter → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 786
ATGAGCGGCGGGGCGCGCGCGTGGCTCGGTCCACGGCCCTCCGCGATCGAGATGGCGGCGACATTGTTCGCCGGCGTCACCGGCATCATGTTCGCGGGCGTCGGGCCGCTGCTGCTCGGCGCGCTCGAACATGCCGGGCGGCTGAGCGCGGCGCAGATCGGGCAGGCCGGGATGATCGAGCTGCTCACCATGGGCCTCGCCGCCGGGCTGACCGGGGCGCTGGCCGGCACGCGCCGGCTCCGCCCGCTGACGATTGCGTGCGGGCTGTTGATGGCGCTGCTCAACGCCGCGACCATGTGGTGCGACGGCTGGGCGCTGGTCGTGGTGCGGGGACTGAACGGCGTGCCGAGCGGCGCGCTGATCTGGCTGATGACCGCGATGATCGTCCGCGCGCCGCGTCCGGAACGTTGGTCGGCGATCTATCTGACCGTGCAGACGCTGGCACAGTTCGTCGTCGTCGCCACGCTCGGGCCGTGGATCGTGCGTCCCTATGGCGCCGACGGTGGCTTCGCGGTGCTGGCGGCGATGAGCCTCGCCGCGGCGCTCGCGGGCTTCGCAGTGCCGCGCGCGTTCGAGCCGCTGCCGGTCGCCGTCGACGAGCCGAGCGGCCTGCCGTCGCCGCGCGGACTGACGGCGCTGGCGGGNNNNNNNNNNNNNCCGCCGATCTCGCGTTGTCGCTGTCGCTGGCGGCGCAGGTGGCGGGCGGCACGCTTGCGACATTGCTCGCCGGGCGGATGCGCTGGCTGCCGGCGTTGCTCGCCTCGCAGGCGGCGATGGCGGCGCTGA
PROTEIN sequence
Length: 262
MSGGARAWLGPRPSAIEMAATLFAGVTGIMFAGVGPLLLGALEHAGRLSAAQIGQAGMIELLTMGLAAGLTGALAGTRRLRPLTIACGLLMALLNAATMWCDGWALVVVRGLNGVPSGALIWLMTAMIVRAPRPERWSAIYLTVQTLAQFVVVATLGPWIVRPYGADGGFAVLAAMSLAAALAGFAVPRAFEPLPVAVDEPSGLPSPRGLTALAXXXXXPPISRCRCRWRRRWRAARLRHCSPGGCAGCRRCSPRRRRWRR*