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SCNpilot_expt_300_bf_scaffold_1529

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1529_1
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..106
DNA (105bp) protein (35aa)
TonB-dependent receptor plug {ECO:0000313|EMBL:ABZ71804.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" so
SCNpilot_expt_300_bf_scaffold_1529_2
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108..893
DNA (786bp) protein (262aa)
Arabinose efflux permease family protein n=1 Tax=Caulobacter sp. AP07 RepID=J3AKP0_9CAUL
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJL33286.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="
putative MFS transporter
SCNpilot_expt_300_bf_scaffold_1529_3
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

842..1213
DNA (372bp) protein (124aa)
Putative MFS transporter n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SY58_CAUSK
putative MFS transporter
Putative MFS transporter {ECO:0000313|EMBL:ABZ71805.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (
SCNpilot_expt_300_bf_scaffold_1529_4
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1518..1820
DNA (303bp) protein (101aa)
Transcriptional regulator n=1 Tax=Caulobacter sp. AP07 RepID=J2GSA9_9CAUL
Transcriptional regulator {ECO:0000313|EMBL:EJL33285.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp.
TetR family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_1529_5
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1845..3107
DNA (1263bp) protein (421aa)
PREDICTED: L-gulonolactone oxidase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C15A6B rbh
FAD-linked oxidoreductase {ECO:0000313|EMBL:EJL33284.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp.
FAD-linked oxidoreductase
SCNpilot_expt_300_bf_scaffold_1529_6
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3813..4199
DNA (387bp) protein (129aa)
Putative amino acid aldolase or racemase n=1 Tax=Caulobacter sp. AP07 RepID=J2HCK3_9CAUL
Putative amino acid aldolase or racemase {ECO:0000313|EMBL:EJL33283.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="
alanine racemase domain-containing protein
SCNpilot_expt_300_bf_scaffold_1529_7
unknown

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4289..4462
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1529_8
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4459..4590
DNA (132bp) protein (44aa)
17 kDa surface antigen n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VFK6_SPHWW
17 kDa surface antigen
17 kDa surface antigen {ECO:0000313|EMBL:ABQ71072.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sourc
SCNpilot_expt_300_bf_scaffold_1529_9
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4731..5228)
DNA (498bp) protein (166aa)
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B58321
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:GAM02453.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
SCNpilot_expt_300_bf_scaffold_1529_10
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5569..6357
DNA (789bp) protein (263aa)
glycosyl transferase family 2 n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA5FA
Glycosyl transferase 2 family protein {ECO:0000313|EMBL:EZP57471.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="
glycosyl transferase family 2
SCNpilot_expt_300_bf_scaffold_1529_11
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6354..7166
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036034A4 rbh
Sphingomonas taxi strain 30a NODE_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29529.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1529_12
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7203..7706
DNA (504bp) protein (168aa)
RNA polymerase sigma-70 factor n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003657676
RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:AIT05927.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingo
SCNpilot_expt_300_bf_scaffold_1529_13
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7699..8625
DNA (927bp) protein (309aa)
Fe2+-dicitrate sensor membrane component n=1 Tax=Sphingomonas elodea RepID=UPI00026321A0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIT05926.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas t
SCNpilot_expt_300_bf_scaffold_1529_14
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8639..10858
DNA (2220bp) protein (740aa)
TonB-dependent Receptor Plug domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WXB8_9SPHN
TonB-dependent Receptor Plug domain protein {ECO:0000313|EMBL:EZP57475.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" so
TonB-dependent receptor
SCNpilot_expt_300_bf_scaffold_1529_15
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10925..12727)
DNA (1803bp) protein (601aa)
succinate dehydrogenase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B70820 rbh
Fumarate reductase {ECO:0000313|EMBL:AJP73821.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WH
fumarate reductase
SCNpilot_expt_300_bf_scaffold_1529_16
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12727..13110)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036832BE
Succinate dehydrogenase {ECO:0000313|EMBL:KHA63260.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
succinate dehydrogenase
SCNpilot_expt_300_bf_scaffold_1529_17
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13110..13454)
DNA (345bp) protein (115aa)
succinate dehydrogenase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B36DD1
Succinate dehydrogenase {ECO:0000313|EMBL:KHA63259.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
succinate dehydrogenase
SCNpilot_expt_300_bf_scaffold_1529_18
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13701..15056
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00036457E8 rbh
Chemotaxis protein {ECO:0000313|EMBL:KHA63258.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant
chemotaxis protein
SCNpilot_expt_300_bf_scaffold_1529_19
unknown

Not on your lists

comp(15095..15406)
DNA (312bp) protein (104aa)

This feature has no annotations

Displaying 19 items

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