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SCNpilot_expt_300_bf_scaffold_1529_12

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 7203..7706

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003657676 similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 156.0
  • Bit_score: 161
  • Evalue 5.50e-37
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 163.0
  • Bit_score: 171
  • Evalue 2.60e-40
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:AIT05927.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingo similarity UNIPROT
DB: UniProtKB
  • Identity: 56.4
  • Coverage: 163.0
  • Bit_score: 171
  • Evalue 1.30e-39

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Taxonomy

Sphingomonas taxi → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
ATGGCGGAGCCACTGGCTTCCGCTTACGGAGAGCAGCGCGCTTTGTTGCTGCGGCTGCTGACGGCGCGGCTCGGCAGCGCGACGGACGCGGAGGATGCGTTGCAGGACCTGTGGTTCCGCATCGTCGCCGGCCCGGCGGGGCCGGTGGACAATCCGGCCGCCTATCTGATGCGCATGGCGAACAATATCGCGACCGACCGGCGGATCGCGGCGCGGCGGCGCGTGGCGCTGGAGACGCATTGGGCCGAATCCGGCGATTCGGCGCACGATCTGCCGACGCCGGAACGCGAGGCGCTGGCGCGCGATGCGCTGCACCGGGTGGACGCGACGATCGCCGCGATGCCGGAGCGGATGCGCGCCGCCTATCGCCTGTTCCGCATCGAGCAGGTGCCGCAGCGCGAGATAGCGGCCCGGCTGGGCATCTCGCTCAGTGCGGTCGAGAAATTGTTGCAGCGTGCCTATCGCCGGTTGCATGCCATGACGGACGGAGGCGGCGATGACTGA
PROTEIN sequence
Length: 168
MAEPLASAYGEQRALLLRLLTARLGSATDAEDALQDLWFRIVAGPAGPVDNPAAYLMRMANNIATDRRIAARRRVALETHWAESGDSAHDLPTPEREALARDALHRVDATIAAMPERMRAAYRLFRIEQVPQREIAARLGISLSAVEKLLQRAYRRLHAMTDGGGDD*