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SCNpilot_expt_300_bf_scaffold_1554_1

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(388..1974)

Top 3 Functional Annotations

Value Algorithm Source
Putative TonB-dependent receptor n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y462_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 36.6
  • Coverage: 453.0
  • Bit_score: 249
  • Evalue 6.40e-63
TonB-dependent receptor {ECO:0000313|EMBL:KGB55567.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 476.0
  • Bit_score: 602
  • Evalue 5.40e-169
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 33.8
  • Coverage: 456.0
  • Bit_score: 237
  • Evalue 1.20e-59

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Taxonomy

Sphingopyxis sp. LC81 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1587
ATGCGGCACCAGCATTTGGGGATTTTTCTGGCCGGCGGCGCGATGCTGGCGATGGCCGCCACGGCACATGCGCAGACCGCTCCGGCGGGTGCCGCGCAGGAAGCCGATCCGTCCGAGATCATCGTGACGGCCACCAAGGAGAAGCAGACGCTTCAGCAGGTTCCGATCTCCGTCGGCGTTGTCAACGGCAAGGCGATGGCGGATCAGGGCGTGCGCCTGTTCACCGATCTCCAGTCGTCGGTGCCCAATCTCCAGATCGACAACACCAACGGCAATTACGCGATCACCATCCGCGGCCTCGGCTCCGGCTCCAGCAACCTGGCGTTCGAGCAGTCGGTCGGCCTGTTCGTCGACGGCGTCTATTCCAGCCGTGCGCGCTCGCTCCAGGTGCCGTTCCTCGACATCGAACGGGTCGAGGTGGTGCGCGGCCCGCAGGGCGCGCTGTTCGGCAAGAACACCAATGCTGGCGCGATCAGCATCATCACCCGCCGCCCGACGCGCGATTTCCAGGCGGAAGCGCGGATCGGCGGCGAGATGGAGCATGGCGGCTTCAACGCCAGCACCTATGTCTCCGCGCCGATCAGCAACACGCTCAGCCTGCGCCTCAGCGGCGAGGCGGGCCGGGCGGACGGCTATATCGACAACCGCCTGACCGGGCAGAAGGACAACAGCTCGAAATATCTCGCCGGCCGCGCGCAATTGCTGTGGCAGCCGACCAGCGATTTCGAGGCGCTGCTGAAGGTCGAGGCGTTCCGCAACGAGATCGACGGATCGAATGCCGTCTATAACAACCTCGGCTCGGCGAGCTGCGCGCTGTGCAACCTCGTCCGCAATGCCAGCGGCGGCGTGAATGCACAGCAATATCCGGGCTTCTGGCGCACCAGCCGCGGCAACCCGGCGGAGCTCGACTTCACCAAGTCGCGCACCGGCGAACTGACGATGACGTGGACGCCGGACGACTGGAATATCACCTCGATCACCGCGTTCCAGAAGATCAACGCGTCGCGAACCTTCAACACGATTCCGGGCGGCCTGCCGCTGCTCAACACGTTGCAGGCAGAGCGCACCACGCAATTCTCGCAGGAGGTACGCGCGGCGAAGAACATCGTCGACGGGATCAAGGCGACGGTCGGCGTTACCTATACCCACGCCGATTCCAGCATCCTCCAGGACGTTTACTACACCGGAAACGCCGCCGGTCTGGCGACGGTGCCGGACGGCCTCGCACACCGGCCGTTCGATCAGAAAAGCTGGTCGCTGTCGCCCTATGCGATCATCGACGCCGATCTCACCAGCCAGCTCAAGTTCAACGGCAGCCTGCGCTACAGCTATGAGGACAAGACGGCGCGCGCGCAGAGCGTCTTCACCGGCGCGCGGCGGCGCGACCATCACGACATGGCTGTTGCTAGCCGCCGTATAGAGCAGCGGCGTGTTGAACGCCTGCGTCACGATCACCTCGTTCGACAGGTTGCGGCCGACCAGCGCGATCTCCCATTTATCGCTGCTGTTGTGGATCGCGATACGCGCGTCGTAGCGCGTATAGGGCGCCTGGCTGTTCAGCGGGTTGAGATCGCCCTGCATGTATGA
PROTEIN sequence
Length: 529
MRHQHLGIFLAGGAMLAMAATAHAQTAPAGAAQEADPSEIIVTATKEKQTLQQVPISVGVVNGKAMADQGVRLFTDLQSSVPNLQIDNTNGNYAITIRGLGSGSSNLAFEQSVGLFVDGVYSSRARSLQVPFLDIERVEVVRGPQGALFGKNTNAGAISIITRRPTRDFQAEARIGGEMEHGGFNASTYVSAPISNTLSLRLSGEAGRADGYIDNRLTGQKDNSSKYLAGRAQLLWQPTSDFEALLKVEAFRNEIDGSNAVYNNLGSASCALCNLVRNASGGVNAQQYPGFWRTSRGNPAELDFTKSRTGELTMTWTPDDWNITSITAFQKINASRTFNTIPGGLPLLNTLQAERTTQFSQEVRAAKNIVDGIKATVGVTYTHADSSILQDVYYTGNAAGLATVPDGLAHRPFDQKSWSLSPYAIIDADLTSQLKFNGSLRYSYEDKTARAQSVFTGARRRDHHDMAVASRRIEQRRVERLRHDHLVRQVAADQRDLPFIAAVVDRDTRVVARIGRLAVQRVEIALHV*