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SCNpilot_expt_300_bf_scaffold_1554_9

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(9542..10678)

Top 3 Functional Annotations

Value Algorithm Source
Carbohydrate-selective porin OprB n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EA57_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 36.5
  • Coverage: 318.0
  • Bit_score: 185
  • Evalue 1.10e-43
carbohydrate-selective porin OprB similarity KEGG
DB: KEGG
  • Identity: 36.5
  • Coverage: 318.0
  • Bit_score: 185
  • Evalue 3.00e-44
Carbohydrate-selective porin OprB {ECO:0000313|EMBL:EHJ61914.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N similarity UNIPROT
DB: UniProtKB
  • Identity: 36.5
  • Coverage: 318.0
  • Bit_score: 185
  • Evalue 1.50e-43

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Taxonomy

Novosphingobium pentaromativorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1137
ATGTCGGAGATGATGAGGCTCGCGAGCTTGCGGATCGTGACGCTGGCCGGCGCGTGCCTGGGCGTTGGCTACGCCCCTCCCGCGTGGGCGGATGATCCGCCTCCGGTCGTTTCGGTTGCCATCCGCAATACACTCGACGCCTGGACGATTCTCCAGGGCGAACGAAGCCAGCCTGTCGTGCTCGACCGTCTGCAGGTATCCGGCACGATCGCTTTCGATCGCATCGGCGTCGATGGCCTGAGCATCCACGCCCAGGTGTTCCGTTTTTCAGGATCGAGCCTGAGCGAGCGCATCGGCGACGTTCAGACGGCGGATGCGATCGATACATTGCCGGTGACGCGGCTGTTCGAGGCCTGGGTCGAGAAGAAGTGGGGGACCAGGGATCGCAGTGTCGCGGTCCGGCTGGGGCTTATGGACCTCAATGCCGACTTCGATTCAATCGCCGCCGGGAGCCTGTTCATCAATTCGTCCCATGGGGTTGGTGCCGATCTCGCACGCAGTGGCCTGAACGGGCCGTCTATTTATCCGGTTTCGGCATTGGGCGCGCGCCTCAACGTCGCTCCTTCCAAAAGGTTCGCCATCCGATATGCGTTGCTCGATGGCGTGGCTGGCGATTCGGCACGCCCACGGGCCTTCGTCATTGCACGCCTTGCGCCGCGTGACGGCACGCTGTCGATCGGGCAAATGGATTGGCGACCAAGCGAGCAAATCCATCTTGCGCTTGGCGCCTGGCGTTACAGTCGGTCCGCGCCGACGCTCGACGGTCGCGGTCGCGGTTTTCGGCAAGGCTTGTTCGTGGAGGTCGAGAAATCGCTGACCAGGCGTTTGGGCGCGTGGGTCCGTGTGGGCGCGGACGATAGTGCCGTCGAGCCGGTGAGCGGATATCTGGGAGCGGGCTTCGTTTTGAAGAACCCGTTCGCCGGGCGCTCCGACGACAGCGTCGGACTCGCGGTGGCGCGCGCCTTCAATAGTTCGGAAGCGCGTCGACTCAAAGGTGTTGAAGCGGCCGAGACAGGTCTCGAACTCACCTATCGGTTGGCTGGGGCGGCAGGATTCGAACCTGCGTATGACGGTACCAAAAACCGTTGCCTTACCGCTTGGCGACGCCCCAGCATCCGTGGCGGAGGCGCCCCTTAG
PROTEIN sequence
Length: 379
MSEMMRLASLRIVTLAGACLGVGYAPPAWADDPPPVVSVAIRNTLDAWTILQGERSQPVVLDRLQVSGTIAFDRIGVDGLSIHAQVFRFSGSSLSERIGDVQTADAIDTLPVTRLFEAWVEKKWGTRDRSVAVRLGLMDLNADFDSIAAGSLFINSSHGVGADLARSGLNGPSIYPVSALGARLNVAPSKRFAIRYALLDGVAGDSARPRAFVIARLAPRDGTLSIGQMDWRPSEQIHLALGAWRYSRSAPTLDGRGRGFRQGLFVEVEKSLTRRLGAWVRVGADDSAVEPVSGYLGAGFVLKNPFAGRSDDSVGLAVARAFNSSEARRLKGVEAAETGLELTYRLAGAAGFEPAYDGTKNRCLTAWRRPSIRGGGAP*