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SCNpilot_expt_300_bf_scaffold_1601_3

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(3111..4124)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1219050 species="Bacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 292.0
  • Bit_score: 451
  • Evalue 7.60e-124
DNA ligase n=1 Tax=Sphingomonas sp. S17 RepID=F3X2C6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 292.0
  • Bit_score: 451
  • Evalue 5.40e-124
NAD-dependent DNA ligase LigA similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 293.0
  • Bit_score: 414
  • Evalue 2.70e-113

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1014
ATGACCGCCCTCCCCTCCGACGATACCGAAGCCGCCGCCGAGCTTGCGCGGCTCGCGCGCGAGATCGCGCACCACAACCGCCGCTATCATGCCGAGGACGCGCCGGAGATTTCCGACGCCGATTACGACGCGCTCGTCCGCCGCAACAATGCGATCGAGGCGGCCTTCCCGCGCCTGCTCCGCGCCGATTCGCCCTCGCGCCTCGTCGGCGCCGCGCCGGCCTCGCATCTCGCCAAGGTGCGCCACGCGAAGCCGATGACCAGCCTCGACAACGCCTTTTCCGACGAGGAGGTGGAGGAGTTCGTCGCGCGCGTCCGCCGCTTCCTGCGCCTGTCGGACGACACGCCGGTCACGCTCACCGCCGAGCCGAAGATCGACGGCCTGTCCTGCTCGCTCCGCTACGAAAACCGCGAGCTGGTGCAGGCGCTGACCCGTGGCGACGGCACGACCGGCGAGGACGTCACCGCCAATGTCGCGACGATCGCCGACATTCCCCGAACTCTCCCGGCCGATGCGCCGGACGTGTTCGAGGTGCGCGGCGAGGTCTATATGGCCAAGGCCGATTTCACCGCGCTCAACGCCCGGCTCGCGGCCGAGGCGGCGGAGACCGGCAAGGAGGCGCGCCAGTTCGCCAACCCGCGCAACGCCGCCGCCGGCTCGCTGCGCCAGAAGGATGCCGCCGTCACCGCCAGCCGCCCGCTGCGCTTCCTCGCGCACGGCTGGGGCGAAGTCTCCGCGCTGCCCGGCGAGACGCAGCTTGCGGTGATGGAGGCGATCCGCGGCTGGGGCTTCCCGGTCGCCGACGATCTCGCCCGCGTCGCGGACGCCGCCGCCGCGCTGGCGCGCTATCGCGCGATCGAGGCGGAGCGCGGCTCGGCTTCGTCGCGCGCGCGCCGCGCTGGGCGATCGCGCACAAATTCCCCGCCGAGCGCGCGCAGACCACGCTGGAGGCGATCGACATCCAGGTCGGCCGCACCGGCAAGCTCACGCCCGTCGCGCGGCTCAAGCCGGTGA
PROTEIN sequence
Length: 338
MTALPSDDTEAAAELARLAREIAHHNRRYHAEDAPEISDADYDALVRRNNAIEAAFPRLLRADSPSRLVGAAPASHLAKVRHAKPMTSLDNAFSDEEVEEFVARVRRFLRLSDDTPVTLTAEPKIDGLSCSLRYENRELVQALTRGDGTTGEDVTANVATIADIPRTLPADAPDVFEVRGEVYMAKADFTALNARLAAEAAETGKEARQFANPRNAAAGSLRQKDAAVTASRPLRFLAHGWGEVSALPGETQLAVMEAIRGWGFPVADDLARVADAAAALARYRAIEAERGSASSRARRAGRSRTNSPPSARRPRWRRSTSRSAAPASSRPSRGSSR*