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SCNpilot_expt_300_bf_scaffold_1601

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1601_1
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1097)
DNA (1095bp) protein (365aa)
TonB-denpendent receptor n=1 Tax=Sphingobium xenophagum RepID=UPI00031E1B13 rbh
DNA, contig: SP646 {ECO:0000313|EMBL:GAN14823.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
TonB-dependent receptor, plug
SCNpilot_expt_300_bf_scaffold_1601_2
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2062..3114)
DNA (1053bp) protein (351aa)
NAD-dependent DNA ligase (EC:6.5.1.2)
DNA ligase {ECO:0000255|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000255|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000255|HAMAP-Rule:MF_01588}; TaxID=392499 species="Bacteria
NAD-dependent DNA ligase LigA n=1 Tax=Sphingomonas wittichii RepID=UPI00030B471F
SCNpilot_expt_300_bf_scaffold_1601_3
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3111..4124)
DNA (1014bp) protein (338aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1219050 species="Bacteri
DNA ligase n=1 Tax=Sphingomonas sp. S17 RepID=F3X2C6_9SPHN
NAD-dependent DNA ligase LigA
SCNpilot_expt_300_bf_scaffold_1601_4
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4186..5754)
DNA (1569bp) protein (523aa)
amino acid permease-associated region, partial n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA0E6 rbh
Amino acid permease {ECO:0000313|EMBL:KFN48942.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR
amino acid permease-associated region
SCNpilot_expt_300_bf_scaffold_1601_5
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5866..6258)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035F4C5B
histidine triad (HIT) protein
Histidine triad (HIT) protein {ECO:0000313|EMBL:KGB59162.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingop
SCNpilot_expt_300_bf_scaffold_1601_6
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6269..6604)
DNA (336bp) protein (112aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:
phosphoribosyl-ATP pyrophosphatase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4EC7C
phosphoribosyl-ATP pyrophosphatase
SCNpilot_expt_300_bf_scaffold_1601_7
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6637..6840)
DNA (204bp) protein (68aa)
Sphingomonas taxi strain 30a NODE_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28599.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
SCNpilot_expt_300_bf_scaffold_1601_8
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6837..7910)
DNA (1074bp) protein (358aa)
cysteine synthase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B486DF rbh
Putative lyase {ECO:0000313|EMBL:GAM02323.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucim
cysteine synthase
SCNpilot_expt_300_bf_scaffold_1601_9
Sphingomonas sp. PAMC 26617, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8193..8432
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289BFB1
SCNpilot_expt_300_bf_scaffold_1601_10
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8490..9116)
DNA (627bp) protein (209aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WYP0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP52612.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
hypothetical protein
Displaying 10 items

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