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SCNpilot_expt_300_bf_scaffold_1452_13

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(9203..11065)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase D n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VGH4_SPHWW similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 613.0
  • Bit_score: 1024
  • Evalue 6.30e-296
  • rbh
DNA ligase D similarity KEGG
DB: KEGG
  • Identity: 81.6
  • Coverage: 613.0
  • Bit_score: 1024
  • Evalue 1.80e-296
DNA ligase D {ECO:0000313|EMBL:ABQ71390.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (st similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 613.0
  • Bit_score: 1024
  • Evalue 8.90e-296

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Taxonomy

Sphingomonas wittichii → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1863
ATGCTTCAGCCGACCGGGAAGCGTAAGCCCGCCAGCGCTGGCCGCCCGTCCGCTGGCCCGCCCGCGTTCCGGCCGGTCCAGCTCGCGCGGCTCGTCGATGCGGTGCCGACCGGCAACCGCTGGCTGCACGAGATGAAATATGACGGCTATCGCACGCTGATCGCGGTCGGCGGTGGCGAGGCCCGCGCCTATACCCGATCGGGGCTCGACTGGTCGGACCGGTTTAGCGCCCTCCTCGCCGATGCGCTCAAGGTCGGCTCGGCGCTGATCGACGGCGAGGCGGTGGTGCTCGATGCGTCGGGCAAGTCGAGCTTCCAGGCATTGCAGAACGCGCTCAAGGGCGCGCCCGGCACGATCGACTATTACGCCTTCGACCTGCTCGAACTCGATGGCGAGGATCTGACGAACCTGCCGCTGGTCGAGCGCAAGAACCGGCTGAAGGCGATCTTGCCGGCTACGAAAAGCCGCCTGCATTATTCCGATCACATCATCGGCAACGGCGAGAAGCTGCTGCACGAGTTTTGCGACGCCGGGCTGGAAGGCGTGATCTCCAAGGAGGTCGATGGCCGCTATGTCGGCTCGCGTAACGGCGGCTGGGTCAAGACCAAGTGCATCAGGCGGCAGGAGTTCGTGATCGTCGGCTGGACGCCGTCGGACAAGTCGCGAACGTTCCGCTCGCTGATGCTTGGCGTCCGTGAGGATGGCGTGCTGCGCTATGCCGGCAAGGTCGGCACCGGGTTCGATACCGCCGAGTTGCTGCGGCTGATGGAGGTGATGAAGCCGCTCGAACAGAAAACGCCGACGGTGAAGGCGCCGCGCGCCGAGGTGCGCGGGGCGCATTGGCTCAAACCCCGGCTGGTGGCGGAGATCGCCTATACCGAGATGACCAATGAAGGGACGCTGCGCCATCCGAGCTATCTCGGCCTGCGCGAGGACAAGAAGCCCGAAGCCGTGGTGCTCGAAGCCGAAGCGCCGGTCGAGACGATCGCGGCGTCCGCGATCACGCTGGTCAAGATCAGCAACCGCGAGCGCGTCATCTACCCCGAGAGCCGTCTGACCAAGGGACAGCTCGCGGACTATTATGCCGCGGTCGCGCCGATCATGCTGCCGTGGGTGGGCAGCCGCCCGATCAGCCTCGTCCGCTGCCCGCAGGGCCGGGCGAAGAAATGCTTCTTCCAGAAACATGACGCCGGGTCGTTCGGCGACACGGTCCACCATGTCGGCATCGCCGAGAAGGACGGCCACGAGGAACCCTATCTCTATATCGATACGCCGGAAGGTCTGCTGACCTGCGTCCAGATGGGGACGATCGAGTTCCACGGCTGGGGCGCACGAATCGAGGACGTCGAGAAGGCCGACCGGCTGGTGTTCGACCTTGATCCTGACGTGGGGCTCGATTTCGAGGCGGTGCGGAGCGCCGCCTTCCATTTCCGCGAGATATTGCAGTCGATCGGCCTCGAAACCTTCCCGATGCCGACCGGCGGCAAGGGCGTCCATGTCATCGCCCCGATCACGCCGCGCGCGGAATGGCCCGAGGTCAAGGATTTCACGCACCGGTTGGCGCAGGCGGTCGCGCAATCAGATCCGAAGCATTTCACCGCCGCCTTGCCCAAGGCCCAGCGCAAGGGGCGGATCTTCGTCGACTATCTGCGCAACCAGCGCGGCGCGACAGCGGTAATGCCATACAGTGCCCGGTCGCGCGAAGGCGCGCCGGTCGCCGCCCCGGTCACCTGGAAGGAGATGGAGACGATCGACACGCCATCGCATTTCCACGTCGGCGACCAGGTGGAATTGCTCAAGCGCGCCGGCTCGAAAGCGCTGACTGGCTGGGGCCGCGCCAGCCAGGAACTGCCCGACTTATGA
PROTEIN sequence
Length: 621
MLQPTGKRKPASAGRPSAGPPAFRPVQLARLVDAVPTGNRWLHEMKYDGYRTLIAVGGGEARAYTRSGLDWSDRFSALLADALKVGSALIDGEAVVLDASGKSSFQALQNALKGAPGTIDYYAFDLLELDGEDLTNLPLVERKNRLKAILPATKSRLHYSDHIIGNGEKLLHEFCDAGLEGVISKEVDGRYVGSRNGGWVKTKCIRRQEFVIVGWTPSDKSRTFRSLMLGVREDGVLRYAGKVGTGFDTAELLRLMEVMKPLEQKTPTVKAPRAEVRGAHWLKPRLVAEIAYTEMTNEGTLRHPSYLGLREDKKPEAVVLEAEAPVETIAASAITLVKISNRERVIYPESRLTKGQLADYYAAVAPIMLPWVGSRPISLVRCPQGRAKKCFFQKHDAGSFGDTVHHVGIAEKDGHEEPYLYIDTPEGLLTCVQMGTIEFHGWGARIEDVEKADRLVFDLDPDVGLDFEAVRSAAFHFREILQSIGLETFPMPTGGKGVHVIAPITPRAEWPEVKDFTHRLAQAVAQSDPKHFTAALPKAQRKGRIFVDYLRNQRGATAVMPYSARSREGAPVAAPVTWKEMETIDTPSHFHVGDQVELLKRAGSKALTGWGRASQELPDL*