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SCNpilot_expt_300_bf_scaffold_1452_18

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 17295..18023

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Gluconobacter frateurii RepID=UPI00029B23FE similarity UNIREF
DB: UNIREF100
  • Identity: 40.3
  • Coverage: 201.0
  • Bit_score: 136
  • Evalue 2.80e-29
TetR family transcriptional regulator {ECO:0000313|EMBL:KCZ97202.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hypho similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 196.0
  • Bit_score: 244
  • Evalue 1.70e-61
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.7
  • Coverage: 209.0
  • Bit_score: 136
  • Evalue 1.00e-29

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Taxonomy

Hyphomonas polymorpha → Hyphomonas → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGATGCTCGACACGCTTTCTCTGGAAAAGACGCCGTCAACGGAGTTAGAACCGAGCGTCAATGATGGATCCAGGGTGGAAAAACTGAACGGGGGGAAGCGTCGAAGCCAGGCGGACCGCAGCGCTGCGACGCGCGCCAAGGTGATTTCCGCGGCGCGGGATATCCTCTTCGCGCAAGGCTATTCCGGCGCGACGATGCACGCGATCCGCGATGCGGCCGGCATAAGCCTTGGCGCGATCCAGCATCAATTCCCCACCAAGGCGAAGATCATGGCCGCCGTCGTCGAGGAGGTCTCGTCGAAGCAGGCAAAGGCCTATGCGGAAGCAATTCGGCGGGGCGGCACTCCCCGCGAATCGCTGGAGAACCTGCTCGACGTGAACTTCGACGGCATCAACCGTCCTGAAAGGGCGGCGCTGCTGGAGATCCACCTTGCCCGGCGAAACGATCCTGATCTCGACAGGGAAGTCGAACCGAGTGCCCGCCGCTTCGGTCGGCGCGTGCGTCTGTGGACCTACTTCATCCTGCGCGCGGCGGGCGTGAATGACACCAGGCTTCTCGTCAGCCTGCAGCTCCTCAACAATGCGATGACCGAGGGGCTGACGGTGGAATTTATCCGCCATCAGGACGCCGCGATTATCAAACAGGCGATACAGATCTGGCGGCGTCAACTGCTCGCGCTAGCATTCGACGTGAGCGCAGCAGACTCTCTGGAGCAGGCCGCCTCCTAG
PROTEIN sequence
Length: 243
MMLDTLSLEKTPSTELEPSVNDGSRVEKLNGGKRRSQADRSAATRAKVISAARDILFAQGYSGATMHAIRDAAGISLGAIQHQFPTKAKIMAAVVEEVSSKQAKAYAEAIRRGGTPRESLENLLDVNFDGINRPERAALLEIHLARRNDPDLDREVEPSARRFGRRVRLWTYFILRAAGVNDTRLLVSLQLLNNAMTEGLTVEFIRHQDAAIIKQAIQIWRRQLLALAFDVSAADSLEQAAS*