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SCNpilot_expt_300_bf_scaffold_5453_6

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(3911..4774)

Top 3 Functional Annotations

Value Algorithm Source
TonB-denpendent receptor n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CB5F3 similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 233.0
  • Bit_score: 334
  • Evalue 8.20e-89
TonB-dependent receptor {ECO:0000313|EMBL:AJR22487.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 61.7
  • Coverage: 253.0
  • Bit_score: 299
  • Evalue 5.30e-78
TonB-dependent receptor-like protein similarity KEGG
DB: KEGG
  • Identity: 61.7
  • Coverage: 253.0
  • Bit_score: 298
  • Evalue 1.80e-78

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Taxonomy

Sphingobium sp. YBL2 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 864
ATGCGTCATATTCTGCTGTGTTCCGCTTCTGCCCTGATGTTTTTCGGCGGACAGGCCACCGCCCAATCGACCGGCAACACCGCTCCCGCCAGCACGGCCAGCGCCCCGGACGCGCAGGCAGCGGGCCAGCTCGGCGACATCATCGTCACCGCTCAGCGGCGCGAGGAAAGCATGCAGCGCGCGGCGGTCGCGGTGAACGTGGCCAAGGGGTCCGACCTCATCTCCGCCGGCATCACCGAGCCGTATCGCCTGTCGGAACTCGCGCCCGGCCTCACTATCCAGCCGACCAGCGCCGGCAATCTGATCTTCATGCGCGGCGTCGGCAACGTGACCACCACGCCCAACAGCGACCCGGCGATCGCGTTCAACTATGACGGCGTCTATATCGCGCGTCCGACCGCGACCAACGGCCTCTTCTTCGATCTCGACCGCGTCGAGGTGCTGAAGGGGCCGCAGGGCACGCTCTACGGCCGCAACGCGACCGGCGGCGCGATCAACGTGATCCCGGCGCAGCCGAGGGCCGGCGAATTGTCCGGCTATCTCACCGGCAGCTACGGCAATTACAACACGCGCACGCTGGAGGGCGCGGTGAACCTGCCGATGGGCGACACCGGCGCGCTGCGCGTTTCGGGTGCGATCGCCAAGCATGACGGCTATCTGCGCGACGGCACCTATGACAACGACACCGCCTCGCTGCGGGTGCAGATGAAATCCGAGCTGACGCCGAACCTCACCGTGCGCATGGCGGCCGATTTCGAGCCAGCTACAATTCGACCGCCTCGGGCAACACCTTCGTCCCGTCGGGCCTGTCGCTCGACGCCGGCAGCTTCACGCCGGAGGCGACCGCCTATCGCACCAGCCTGA
PROTEIN sequence
Length: 288
MRHILLCSASALMFFGGQATAQSTGNTAPASTASAPDAQAAGQLGDIIVTAQRREESMQRAAVAVNVAKGSDLISAGITEPYRLSELAPGLTIQPTSAGNLIFMRGVGNVTTTPNSDPAIAFNYDGVYIARPTATNGLFFDLDRVEVLKGPQGTLYGRNATGGAINVIPAQPRAGELSGYLTGSYGNYNTRTLEGAVNLPMGDTGALRVSGAIAKHDGYLRDGTYDNDTASLRVQMKSELTPNLTVRMAADFEPATIRPPRATPSSRRACRSTPAASRRRRPPIAPA*