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SCNpilot_expt_300_bf_scaffold_5453

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_5453_1
unknown

Not on your lists

comp(3..197)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_5453_2
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(301..1245)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0FZG7_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA96770.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium bad
beta-lactamase-like protein
SCNpilot_expt_300_bf_scaffold_5453_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(1258..1500)
DNA (243bp) protein (81aa)
amidohydrolase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
SCNpilot_expt_300_bf_scaffold_5453_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1446..2477)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HPH0547 RepID=S3C508_9ACTO
amidohydrolase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_5453_5
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2571..3653)
DNA (1083bp) protein (361aa)
TonB-denpendent receptor n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CB5F3
TonB-dependent receptor {ECO:0000313|EMBL:AJR22487.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
TonB-dependent receptor-like protein
SCNpilot_expt_300_bf_scaffold_5453_6
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3911..4774)
DNA (864bp) protein (288aa)
TonB-denpendent receptor n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CB5F3
TonB-dependent receptor {ECO:0000313|EMBL:AJR22487.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
TonB-dependent receptor-like protein
SCNpilot_expt_300_bf_scaffold_5453_7
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4895..5602)
DNA (708bp) protein (236aa)
Transcriptional regulator, GntR family n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A426_STAND
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADH87846.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya
SCNpilot_expt_300_bf_scaffold_5453_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5695..6558
DNA (864bp) protein (288aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
5-carboxymethyl-2-hydroxymuconate delta-isomerase n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z0Q6_SPHJU rbh
Fumarylacetoacetate hydrolase family protein {ECO:0000313|EMBL:GAO52938.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;
SCNpilot_expt_300_bf_scaffold_5453_9
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6584..8134
DNA (1551bp) protein (517aa)
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase n=1 Tax=Acidovorax sp. CF316 RepID=J0KJZ3_9BURK rbh
FAD-monooxygenase {ECO:0000313|EMBL:KGD89978.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_5453_10
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8131..9444
DNA (1314bp) protein (438aa)
major facilitator superfamily transporter n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CB5F0 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKC27223.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
major facilitator superfamily transporter
Displaying 10 items

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