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SCNpilot_expt_300_bf_scaffold_6703_4

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 1209..1745

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003682657 similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 170.0
  • Bit_score: 261
  • Evalue 7.10e-67
Type VI secretion protein {ECO:0000313|EMBL:ETI62734.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium s similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 170.0
  • Bit_score: 261
  • Evalue 1.00e-66
type VI secretion protein similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 178.0
  • Bit_score: 252
  • Evalue 7.10e-65

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Taxonomy

Sphingobium sp. C100 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGGCGACCCTCGCCCCTGACCGCCCGGCGACGCGTTGGCGACCGCGCCGACGGCTGTGGGGGGCGCTCGCCGCCTTCGTGACCGGCAGCGTCGCGCTTTCTGCCCTCGCGACATTCCGCGACGATCACGCGCTGCTCATCAACCAGACCGACTCGCTGCCCAATTGGGCGTTCGTCATCCACCGCAATGCGGCGCCCGCGCGCGGCGACTATGTCTTCTTCTCGCCGCCGCCGAGCGCGCTGGTGCAGCGCCACTTCGGTCGGCACCCGCAGATGTTCGGCAAGATCGTCTATGGAATGCCCGGCGACGTTGTCGGGCACGTTGGCCCCATGGTGCTGATCAACGGCCGGCCGATCGCGCGCATGAAGCCGCTGACGAGGTCCGGCGAGCCGTTGACCCCTGGGGCGACGGGCAGGATTCCGGCCGGTTGCTATTACACCGGGACGCCGCACCCCGACGGCTTCGACAGCCGCTATGCCGATATCGGATTCGTCTGCGCGCGCCAGTTCGTCGGTACCGGCGAGGCGATCCTGTGA
PROTEIN sequence
Length: 179
MATLAPDRPATRWRPRRRLWGALAAFVTGSVALSALATFRDDHALLINQTDSLPNWAFVIHRNAAPARGDYVFFSPPPSALVQRHFGRHPQMFGKIVYGMPGDVVGHVGPMVLINGRPIARMKPLTRSGEPLTPGATGRIPAGCYYTGTPHPDGFDSRYADIGFVCARQFVGTGEAIL*