ggKbase home page

SCNpilot_expt_300_bf_scaffold_6703

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_6703_1
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..263
DNA (261bp) protein (87aa)
Type-IV secretion system protein TraC, partial n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248AED6
Type-IV secretion system protein TraC {ECO:0000313|EMBL:KEZ13742.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sph
Type-IV secretion system protein TraC
SCNpilot_expt_300_bf_scaffold_6703_2
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

267..710
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VGR4_SPHWW
Uncharacterized protein {ECO:0000313|EMBL:AKH18751.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
hypothetical protein
SCNpilot_expt_300_bf_scaffold_6703_3
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

659..1228
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MP68_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:CCW17228.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium jap
hypothetical protein
SCNpilot_expt_300_bf_scaffold_6703_4
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1209..1745
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003682657
Type VI secretion protein {ECO:0000313|EMBL:ETI62734.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium s
type VI secretion protein
SCNpilot_expt_300_bf_scaffold_6703_5
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1742..2386
DNA (645bp) protein (215aa)
conjugal transfer protein TraW n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC472
Type-F conjugative transfer system protein TraW
Type-F conjugative transfer system protein TraW {ECO:0000313|EMBL:AGH51820.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;"
SCNpilot_expt_300_bf_scaffold_6703_6
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2386..2658
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VJ50_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP77119.1}; Flags: Precursor;; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
hypothetical protein
SCNpilot_expt_300_bf_scaffold_6703_7
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3073..3609
DNA (537bp) protein (179aa)
conjugal transfer protein TraU n=2 Tax=Sphingobium xenophagum RepID=UPI00036060C9
Conjugal transfer protein TraU {ECO:0000313|EMBL:ETI62731.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob
TraU family protein
SCNpilot_expt_300_bf_scaffold_6703_8
Sphingobium lucknowense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3621..4367
DNA (747bp) protein (249aa)
Type-F conjugative transfer system pilin assembly protein TrbC n=4 Tax=Sphingobium RepID=T0GUU5_9SPHN rbh
Pilus assembly protein {ECO:0000313|EMBL:KER34545.1}; TaxID=1450518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium luck
type-F conjugative transfer system pilin assembly protein TrbC
SCNpilot_expt_300_bf_scaffold_6703_9
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4364..5779
DNA (1416bp) protein (472aa)
conjugal transfer protein TraN n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C639 rbh
Mating pair stabilization TraN family protein {ECO:0000313|EMBL:KEQ54756.1}; Flags: Precursor;; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
conjugal transfer mating pair stabilization protein TraN
Displaying 9 items

View Taxonomy