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SCNpilot_expt_300_bf_scaffold_6703_8

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 3621..4367

Top 3 Functional Annotations

Value Algorithm Source
Type-F conjugative transfer system pilin assembly protein TrbC n=4 Tax=Sphingobium RepID=T0GUU5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 248.0
  • Bit_score: 347
  • Evalue 1.40e-92
  • rbh
Pilus assembly protein {ECO:0000313|EMBL:KER34545.1}; TaxID=1450518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium luck similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 248.0
  • Bit_score: 345
  • Evalue 5.60e-92
type-F conjugative transfer system pilin assembly protein TrbC similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 248.0
  • Bit_score: 343
  • Evalue 4.30e-92

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Taxonomy

Sphingobium lucknowense → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
GTGCGGCTTCTTCCCCTCGCCCTCTGCGCGCTTCTCGGCAGCGCGGGCCTGTCGGCGCTGCTGGCGCAGACCGTGGACGGGCTCGACTTGGAGGCGGTGAAGCGCCGCTCGCAGGCGATGCAGGCCGAAGTTGAGGCTTTCGCCGATCAGGTCAAGGACCGTGGCGCGGAGGTTCGCGAGCAGGCCGAAACGGTGCGGACGGATGCGCAGGCCAATCTCCATCGCGTCGCCCGGTCCGACCTACCCAAGGGTCCGGCCGGCCCGGTCGATTTCGACGAGATCGTCGCGGGCGCCGACGCCAACGCGCGCGCCACGCGGGGCGAGGCGCCGCAGCTGATCGTCTTCGCGAGCCTGTCGATGCCCGAAGCCTCGCTGCGCCAGCTGATCGCCGACACCGCGCGCGCCGGCGGCGTCGTCGTTTTCCGGGGCTTTCCGAACAATTCGATGAAGCTGTTCACGCAGGCGATCGCCAGGGTCGTCGAGCGGCAGGACGAATATGACAATATCGGCATCGATCCGCGCCTGTTCCGCGCGTTCGAGGTACGGGCGGTGCCGACCTATGTGGTGGTGTCCTCCGATTTCGACCTATGCGCGGGGTTTTCCTGCCGGACCGCGGTGCCGCCGTTCGACCGGATCATCGGCAACGTCACGGTCGACTATGCGCTGAGCACCTTTGCCGAGGGCGGCGGACCTGGCGCGGCTGTCGCGCGGGTCGGACTCGCCAATTTGCGGAAGACCCGGCCGTGA
PROTEIN sequence
Length: 249
VRLLPLALCALLGSAGLSALLAQTVDGLDLEAVKRRSQAMQAEVEAFADQVKDRGAEVREQAETVRTDAQANLHRVARSDLPKGPAGPVDFDEIVAGADANARATRGEAPQLIVFASLSMPEASLRQLIADTARAGGVVVFRGFPNNSMKLFTQAIARVVERQDEYDNIGIDPRLFRAFEVRAVPTYVVVSSDFDLCAGFSCRTAVPPFDRIIGNVTVDYALSTFAEGGGPGAAVARVGLANLRKTRP*