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SCNpilot_expt_300_bf_scaffold_4002_2

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 950..1300

Top 3 Functional Annotations

Value Algorithm Source
PbsX family transcriptional regulator n=1 Tax=Rhizobium mongolense RepID=UPI0003B7B85B similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 115.0
  • Bit_score: 163
  • Evalue 1.00e-37
XRE family transcriptional regulator {ECO:0000313|EMBL:KGD89185.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhiz similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 112.0
  • Bit_score: 163
  • Evalue 1.80e-37
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 115.0
  • Bit_score: 152
  • Evalue 6.60e-35

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 351
ATGCCAGAATCGGTCTTCAACATGCTGGGCTCTCAGCTCCGCGCGGCACGGATGCAGCGCGGACTAAGCCAACCTGCGCTGGCTGCGCGGCTCGGCCGCAATCGGGCTCGCATCTCGGAACTGGAGCGCGATCTCGCAAACGATCGCTGGGGCCGCGACAGACTCACGCTGTTCGCAGAGATTTGTGACGCACTCGACCTTGTCCCCATCCTGACACCTCGTTCGCGTGCTGCGGAAATCCGTGCGCTGGTCGGGGGAAGGGATCAAAGCACGCCGCGCGCCCATCCGGCACGCACCGCATATGATGAGCTCTTCGTCGATCTCGGAGAGGACGAAGGAGGAGAGGCCTGA
PROTEIN sequence
Length: 117
MPESVFNMLGSQLRAARMQRGLSQPALAARLGRNRARISELERDLANDRWGRDRLTLFAEICDALDLVPILTPRSRAAEIRALVGGRDQSTPRAHPARTAYDELFVDLGEDEGGEA*