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SCNpilot_expt_300_bf_scaffold_4002

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_4002_1
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..155
DNA (153bp) protein (51aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EK17_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ58356.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
SCNpilot_expt_300_bf_scaffold_4002_2
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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950..1300
DNA (351bp) protein (117aa)
PbsX family transcriptional regulator n=1 Tax=Rhizobium mongolense RepID=UPI0003B7B85B
XRE family transcriptional regulator {ECO:0000313|EMBL:KGD89185.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhiz
helix-turn-helix domain-containing protein
SCNpilot_expt_300_bf_scaffold_4002_3
unknown

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comp(1213..1530)
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_4002_4
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2073..2534
DNA (462bp) protein (154aa)
HipA domain-containing protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5S5K8_RHIET
Phosphatidylinositol kinase {ECO:0000313|EMBL:KGD89184.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;"
HipA domain-containing protein
SCNpilot_expt_300_bf_scaffold_4002_5
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2541..3248)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K3E8_AGRVS rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAJ96260.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
SCNpilot_expt_300_bf_scaffold_4002_6
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3524..4168)
DNA (645bp) protein (215aa)
UPI0003D5CF8E related cluster n=1 Tax=unknown RepID=UPI0003D5CF8E
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
SCNpilot_expt_300_bf_scaffold_4002_7
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4683..4883
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0KB10_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB33869.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium umm
DNA-binding protein
SCNpilot_expt_300_bf_scaffold_4002_8
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4887..6134
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0KKM1_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB33868.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium umm
HipA domain-containing protein
SCNpilot_expt_300_bf_scaffold_4002_9
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6555..7421)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. HDIP04 RepID=T0GUL3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP72197.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
SCNpilot_expt_300_bf_scaffold_4002_10
unknown

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comp(7418..7510)
DNA (93bp) protein (31aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_4002_11
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7630..8394
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7GT33_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EZP72198.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
SCNpilot_expt_300_bf_scaffold_4002_12
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8409..9143)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Sphingobium chinhatense RepID=UPI000372C0A9 rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP72199.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
Displaying 12 items

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