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SCNpilot_expt_300_bf_scaffold_1128

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1128_1
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1046
DNA (1044bp) protein (348aa)
Xylose isomerase {ECO:0000256|RuleBase:RU000609, ECO:0000256|SAAS:SAAS00108511}; EC=5.3.1.5 {ECO:0000256|RuleBase:RU000609, ECO:0000256|SAAS:SAAS00108511};; TaxID=1287182 species="Bacteria; Proteobact
UPI0003D0401E related cluster n=1 Tax=unknown RepID=UPI0003D0401E rbh
xylose isomerase domain-containing protein
SCNpilot_expt_300_bf_scaffold_1128_2
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1043..1909
DNA (867bp) protein (289aa)
UPI0003CF71B3 related cluster n=1 Tax=unknown RepID=UPI0003CF71B3
Ribokinase {ECO:0000313|EMBL:ESY75441.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;
PfkB domain-containing protein
SCNpilot_expt_300_bf_scaffold_1128_3
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2088..2459
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Rhizobium phaseoli RepID=UPI0001904380
Uncharacterized protein {ECO:0000313|EMBL:KEC75786.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1128_4
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2452..2943
DNA (492bp) protein (164aa)
DNA topology modulation protein n=1 Tax=Dickeya sp. D s0432-1 RepID=U6ZE19_9ENTR
ATPase AAA {ECO:0000313|EMBL:KGD92076.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1128_5
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2945..4273)
DNA (1329bp) protein (443aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; De
Two-component sensor histidine kinase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JAZ5_AGRRK rbh
two-component sensor histidine kinase
SCNpilot_expt_300_bf_scaffold_1128_6
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4270..4929)
DNA (660bp) protein (220aa)
DNA-binding response regulator n=2 Tax=Oligotropha carboxidovorans RepID=B6JDT1_OLICO
Transcriptional regulator {ECO:0000313|EMBL:KFL26822.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;
qseB; transcriptional regulator QseB
SCNpilot_expt_300_bf_scaffold_1128_7
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5077..5340
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NB92_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CDP50291.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1128_8
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5360..5881
DNA (522bp) protein (174aa)
cytochrome B561 n=1 Tax=Thalassospira lucentensis RepID=UPI0003B68C81
Cytochrome b {ECO:0000313|EMBL:CDP50290.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
cytochrome b
SCNpilot_expt_300_bf_scaffold_1128_9
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(5893..6663)
DNA (771bp) protein (257aa)
oxidoreductase n=1 Tax=Streptomyces sp. CNB091 RepID=UPI000361E24F
Oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:EFE83440.2}; TaxID=457425 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus J1074.;"
SCNpilot_expt_300_bf_scaffold_1128_10
Pseudoalteromonas sp. BSi20652, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7287..7865)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00030414A3
Putative uncharacterized protein {ECO:0000313|EMBL:GAA59066.1}; TaxID=388384 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" sourc
periplasmic protease
SCNpilot_expt_300_bf_scaffold_1128_11
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8466..8858
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AB97_COLFT
Methyltransferase {ECO:0000313|EMBL:KKB10456.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
Displaying 11 items

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