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SCNpilot_expt_300_bf_scaffold_1131

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1131_1
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..949
DNA (948bp) protein (316aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=9 Tax=Pseudomonas aeruginosa RepID=B7VAA4_PSEA8
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:CEA06808.1}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
SCNpilot_expt_300_bf_scaffold_1131_2
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1214..1690)
DNA (477bp) protein (159aa)
UPI0003D03FB2 related cluster n=1 Tax=unknown RepID=UPI0003D03FB2
MucR family transcriptional regulator {ECO:0000313|EMBL:KFL25493.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp
transcriptional regulator
SCNpilot_expt_300_bf_scaffold_1131_3
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2412..3803
DNA (1392bp) protein (464aa)
SARP family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI00036D0A37
Uncharacterized protein {ECO:0000313|EMBL:KKB80291.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
SARP family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_1131_4
unknown

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3831..3956
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1131_5
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3960..5114
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HQ55_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJN02138.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1131_6
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5111..5806
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. AP16 RepID=J2CY06_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJK82084.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1131_7
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5817..6083)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0TBX0_9BRAD
Usg protein
Uncharacterized protein {ECO:0000313|EMBL:CCD95705.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
SCNpilot_expt_300_bf_scaffold_1131_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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6253..6657
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQC7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF57951.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedo
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1131_9
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6748..6966
DNA (219bp) protein (73aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL29656.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCNpilot_expt_300_bf_scaffold_1131_10
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7016..8722
DNA (1707bp) protein (569aa)
phosphoglycolate phosphatase (EC:3.1.3.18)
Putative phosphoglycolate phosphatase {ECO:0000313|EMBL:AFL52907.1}; EC=3.1.3.18 {ECO:0000313|EMBL:AFL52907.1};; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhiz
Putative phosphoglycolate phosphatase n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3XAK1_RHIFR rbh
SCNpilot_expt_300_bf_scaffold_1131_11
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8737..9723)
DNA (987bp) protein (329aa)
Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JLR2_AGRRK rbh
Cupin {ECO:0000313|EMBL:KFL29864.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
transcriptional regulator
SCNpilot_expt_300_bf_scaffold_1131_12
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9875..10624
DNA (750bp) protein (250aa)
Hydrolase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JLR1_AGRRK rbh
Hydrolase {ECO:0000313|EMBL:KFL29865.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hydrolase
SCNpilot_expt_300_bf_scaffold_1131_13
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10783..11208
DNA (426bp) protein (142aa)
YCII-related n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IVU3_METNO
YCII-like protein
YCII-related {ECO:0000313|EMBL:ACL62533.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans
SCNpilot_expt_300_bf_scaffold_1131_14
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11255..12547
DNA (1293bp) protein (431aa)
RNA polymerase subunit sigma-24 n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FT37_9RHIZ rbh
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:ESX82857.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizo
RNA polymerase ECF-subfamily sigma factor
SCNpilot_expt_300_bf_scaffold_1131_15
Haematobacter missouriensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12607..12744
DNA (138bp) protein (46aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=366616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haem
UvrD/REP helicase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A3E0_STAND
UvrD/REP helicase
Displaying 15 items

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