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SCNpilot_expt_300_bf_scaffold_1387

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1387_1
unknown

Not on your lists

comp(3..485)
DNA (483bp) protein (161aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1387_2
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(482..1051)
DNA (570bp) protein (190aa)
Putative RNA polymerase sigma factor n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R924_PELHB
RNA polymerase sigma70 {ECO:0000313|EMBL:KFL28885.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
putative RNA polymerase sigma factor
SCNpilot_expt_300_bf_scaffold_1387_3
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1188..1376
DNA (189bp) protein (63aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB75976.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
SCNpilot_expt_300_bf_scaffold_1387_4
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1442..1684
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A9K4_THEID
Uncharacterized protein {ECO:0000313|EMBL:KDB03756.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas s
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1387_5
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1685..2779)
DNA (1095bp) protein (365aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; H
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R926_PELHB
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
SCNpilot_expt_300_bf_scaffold_1387_6
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2951..4747
DNA (1797bp) protein (599aa)
Flagellar hook-length control protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CDU1_9RHIZ
Flagellar hook-length control protein {ECO:0000313|EMBL:KFC62440.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1387_7
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4834..5526
DNA (693bp) protein (231aa)
Flagellar basal-body rod modification protein FlgD n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R928_PELHB
flagellar basal body rod modification protein FlgD
Flagellar basal-body rod modification protein FlgD {ECO:0000313|EMBL:AEQ52408.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.
SCNpilot_expt_300_bf_scaffold_1387_8
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5971..6204
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R929_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07445.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1387_9
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6306..6932)
DNA (627bp) protein (209aa)
glutathione S-transferase n=1 Tax=Pseudomonas chlororaphis RepID=UPI0002F584BB
Glutathione S-transferase {ECO:0000313|EMBL:KFL28890.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;
glutathione S-transferase
SCNpilot_expt_300_bf_scaffold_1387_10
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7035..8735
DNA (1701bp) protein (567aa)
Flagellar M-ring protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R930_PELHB rbh
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 1713
flagellar M-ring protein FliF
SCNpilot_expt_300_bf_scaffold_1387_11
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8747..9826
DNA (1080bp) protein (360aa)
Flagellar motor switch protein FliG n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R931_PELHB rbh
Flagellar motor switch protein FliG {ECO:0000256|PIRNR:PIRNR003161}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia li
flagellar motor switch protein FliG
SCNpilot_expt_300_bf_scaffold_1387_12
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9826..10467
DNA (642bp) protein (214aa)
FlbE protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R932_PELHB
FlbE protein {ECO:0000313|EMBL:CDP53077.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
FlbE protein
SCNpilot_expt_300_bf_scaffold_1387_13
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10464..10787
DNA (324bp) protein (108aa)
Flagellar motor switch protein FliN n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R933_PELHB
flagellar motor switch protein FliN
Flagellar motor switch protein FliN {ECO:0000313|EMBL:AEQ52413.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pela
SCNpilot_expt_300_bf_scaffold_1387_14
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10790..12160
DNA (1371bp) protein (457aa)
Transcriptional regulatory protein flbD n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R934_PELHB rbh
ATPase AAA {ECO:0000313|EMBL:KFL28895.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
transcriptional regulatory protein flbD
SCNpilot_expt_300_bf_scaffold_1387_15
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12332..13648
DNA (1317bp) protein (439aa)
Flagellar biosynthesis protein FlhA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R935_PELHB
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:CDP53074.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp.
flagellar biosynthesis protein FlhA
Displaying 15 items

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