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SCNpilot_expt_300_bf_scaffold_1534

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1534_1
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..592
DNA (591bp) protein (197aa)
Mlr6842 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q987Z4_RHILO
efflux transporter
Mlr6842 protein {ECO:0000313|EMBL:BAB53056.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAF
SCNpilot_expt_300_bf_scaffold_1534_2
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(691..1089)
DNA (399bp) protein (133aa)
Response regulator n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SCV5_9RHIZ
response regulator
Response regulator {ECO:0000313|EMBL:AHB48348.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrati
SCNpilot_expt_300_bf_scaffold_1534_3
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1288..1542
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI00035F2C52
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ70302.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (s
SCNpilot_expt_300_bf_scaffold_1534_4
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1539..2054)
DNA (516bp) protein (172aa)
Transcriptional regulator, MerR family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6H3_PELHB
Transcriptional regulator, MerR family {ECO:0000313|EMBL:CDP54330.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia s
transcriptional regulator, MerR family
SCNpilot_expt_300_bf_scaffold_1534_5
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2081..2392)
DNA (312bp) protein (104aa)
Integration host factor subunit alpha n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6H2_PELHB
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1535287 species="Bacteria; Proteobacte
integration host factor alpha subunit
SCNpilot_expt_300_bf_scaffold_1534_6
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2562..3530)
DNA (969bp) protein (323aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6H1_PELHB rbh
3-oxoacyl-ACP synthase
SCNpilot_expt_300_bf_scaffold_1534_7
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3527..4609)
DNA (1083bp) protein (361aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase
Phosphate acyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6H0_PELHB
phosphate:acyl-ACP acyltransferase PlsX
SCNpilot_expt_300_bf_scaffold_1534_8
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4804..5352)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6G9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL26405.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1534_9
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5349..5876)
DNA (528bp) protein (176aa)
Ubiquinol-cytochrome C chaperone n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6G8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC32033.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
ubiquinol-cytochrome C chaperone
SCNpilot_expt_300_bf_scaffold_1534_10
unknown

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6037..6132
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 10 items

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