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SCNpilot_expt_300_bf_scaffold_1620

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1620_1
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..852)
DNA (852bp) protein (284aa)
lldD; L-lactate dehydrogenase (cytochrome) (EC:1.1.2.3)
L-lactate dehydrogenase n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PB93_9BURK
L-lactate dehydrogenase {ECO:0000313|EMBL:KFC62088.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
SCNpilot_expt_300_bf_scaffold_1620_2
unknown

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1032..1604
DNA (573bp) protein (191aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1620_3
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1706..4288)
DNA (2583bp) protein (861aa)
Lead, cadmium, zinc and mercury transporting ATPas e {ECO:0000313|EMBL:CDP50995.1}; EC=3.6.3.3 {ECO:0000313|EMBL:CDP50995.1};; EC=3.6.3.4 {ECO:0000313|EMBL:CDP50995.1};; EC=3.6.3.5 {ECO:0000313|EMBL:C
Cation transporting P-type ATPase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98C24_RHILO rbh
actP; copper-transporting ATPase
SCNpilot_expt_300_bf_scaffold_1620_4
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4421..4828
DNA (408bp) protein (136aa)
Transcriptional regulator, MerR family n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M045_METRJ
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ACB24528.1}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source=
SCNpilot_expt_300_bf_scaffold_1620_5
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4815..5228
DNA (414bp) protein (138aa)
Acetyltransferase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VUX3_RHILT
Acetyltransferase {ECO:0000313|EMBL:KFL25353.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
acetyltransferase
SCNpilot_expt_300_bf_scaffold_1620_6
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5285..6433)
DNA (1149bp) protein (383aa)
NAD-dependent succinate aldehyde dehydrogenase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K3X5_AGRVS
attK; NAD-dependent succinate aldehyde dehydrogenase
NAD-dependent succinate aldehyde dehydrogenase {ECO:0000313|EMBL:ACM39630.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gr
SCNpilot_expt_300_bf_scaffold_1620_7
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6433..6648)
DNA (216bp) protein (72aa)
NAD-dependent succinate aldehyde dehydrogenase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K3X5_AGRVS
attK; NAD-dependent succinate aldehyde dehydrogenase
NAD-dependent succinate aldehyde dehydrogenase {ECO:0000313|EMBL:ACM39630.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gr
SCNpilot_expt_300_bf_scaffold_1620_8
unknown

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comp(7783..8004)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1620_9
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8173..8577)
DNA (405bp) protein (135aa)
Transcription elongation factor GreA/GreB n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A8T6_RHIFH
Regulator of nucleoside diphosphate kinase {ECO:0000313|EMBL:CDP51013.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devos
rnk1; transcription elongation factor GreA/GreB
SCNpilot_expt_300_bf_scaffold_1620_10
unknown

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comp(8834..9205)
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1620_11
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9421..9909)
DNA (489bp) protein (163aa)
D-galactarate dehydratase/Altronate hydrolase domain-containing protein (EC:4.2.1.42)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036A941A
Galactarate dehydratase {ECO:0000313|EMBL:KKB08254.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_300_bf_scaffold_1620_12
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9900..10640)
DNA (741bp) protein (247aa)
D-galactarate dehydratase/Altronate hydrolase domain-containing protein (EC:4.2.1.42)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036A941A
Galactarate dehydratase {ECO:0000313|EMBL:KFL26146.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
SCNpilot_expt_300_bf_scaffold_1620_13
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10633..10851)
DNA (219bp) protein (73aa)
Altronate hydrolase {ECO:0000313|EMBL:CDP51010.1}; EC=4.2.1.7 {ECO:0000313|EMBL:CDP51010.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devo
SCNpilot_expt_300_bf_scaffold_1620_14
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11017..11772
DNA (756bp) protein (252aa)
GntR family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLA2_9RHIZ
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CDP51011.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia s
GntR family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_1620_15
unknown

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11802..11873
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 15 items

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