ggKbase home page

SCNpilot_expt_300_bf_scaffold_2119

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_2119_1
Vibrio nigripulchritudo, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(338..1426)
DNA (1089bp) protein (363aa)
Putative Glycosyl hydrolase n=1 Tax=Vibrio nigripulchritudo SOn1 RepID=U4J7I8_9VIBR rbh
Putative Glycosyl hydrolase {ECO:0000313|EMBL:CCN41435.1}; TaxID=1238441 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio nigripulchritudo FT
putative Glycosyl hydrolase rbh
SCNpilot_expt_300_bf_scaffold_2119_2
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1448..2245)
DNA (798bp) protein (266aa)
Putative transcriptional regulator, GntR family n=9 Tax=Vibrio nigripulchritudo RepID=U4DQC5_9VIBR
Uncharacterized protein {ECO:0000313|EMBL:EYD76204.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrob
putative transcriptional regulator, GntR family
SCNpilot_expt_300_bf_scaffold_2119_3
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2576..3283)
DNA (708bp) protein (236aa)
Transcriptional regulator n=1 Tax=Burkholderia dolosa AUO158 RepID=A2WE59_9BURK
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CDP51663.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia s
bacterial regulatory s, gntR family protein
SCNpilot_expt_300_bf_scaffold_2119_4
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3508..4701
DNA (1194bp) protein (398aa)
ABC transporter substrate-binding protein n=1 Tax=Oceanicola sp. S124 RepID=UPI000255856B
Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein {ECO:0000313|EMBL:KFC69528.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
ABC transporter substrate binding protein (sugar)
SCNpilot_expt_300_bf_scaffold_2119_5
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4789..5730
DNA (942bp) protein (314aa)
ABC transporter, permease n=2 Tax=Rhizobium meliloti RepID=F7XFP5_SINMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY44548.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytic
SCNpilot_expt_300_bf_scaffold_2119_6
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5741..6583
DNA (843bp) protein (281aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Nitratireductor indicus C115 RepID=K2P7C0_9RHIZ
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AJY44547.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytic
SCNpilot_expt_300_bf_scaffold_2119_7
RLO_PLX_64_10, Bacteria

Not on your lists

6607..7530
DNA (924bp) protein (308aa)
dihydrodipicolinate synthetase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein n=2 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003709CF2
hypothetical protein
SCNpilot_expt_300_bf_scaffold_2119_8
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7581..8900
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00036322AC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY47829.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytic
SCNpilot_expt_300_bf_scaffold_2119_9
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9516..10676
DNA (1161bp) protein (387aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UDG9_SINMW
Choline dehydrogenase {ECO:0000313|EMBL:KGM32698.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus
glucose-methanol-choline oxidoreductase
SCNpilot_expt_300_bf_scaffold_2119_10
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10692..13082)
DNA (2391bp) protein (797aa)
Alpha-mannosidase n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CPJ6_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB13716.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
alpha-mannosidase
SCNpilot_expt_300_bf_scaffold_2119_11
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13806..14618)
DNA (813bp) protein (271aa)
ABC transporter, permease protein n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CPJ7_9RHOB rbh
Sugar ABC transporter, permease protein, ThuG {ECO:0000313|EMBL:KFC69706.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="De
hypothetical protein
SCNpilot_expt_300_bf_scaffold_2119_12
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14618..15508)
DNA (891bp) protein (297aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CPJ8_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB08954.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
integral membrane transport protein
SCNpilot_expt_300_bf_scaffold_2119_13
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15620..16183)
DNA (564bp) protein (188aa)
Putative extracellular solute-binding protein n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CPJ9_9RHOB
Various polyols ABC transporter, periplasmic substrate-binding protein {ECO:0000313|EMBL:KFC69708.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiace
extracellular solute-binding lipoprotein
Displaying 13 items

View Taxonomy