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SCNpilot_expt_300_bf_scaffold_2234

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_2234_1
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..714
DNA (714bp) protein (238aa)
Flavoprotein reductase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YCL8_9RHIZ
Flavoprotein reductase {ECO:0000313|EMBL:EHH10340.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amor
flavoprotein reductase
SCNpilot_expt_300_bf_scaffold_2234_2
unknown

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comp(636..1037)
DNA (402bp) protein (134aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_2234_3
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1039..1566
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0CZ51_CAUCE
NLP/P60 protein {ECO:0000313|EMBL:KFC61686.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
NLP/P60 protein
SCNpilot_expt_300_bf_scaffold_2234_4
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1638..2303)
DNA (666bp) protein (222aa)
ABC transporter n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5QCI9_9RHIZ rbh
Peptide ABC transporter ATPase {ECO:0000313|EMBL:KFL29616.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina
ABC transporter
SCNpilot_expt_300_bf_scaffold_2234_5
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2533..3285)
DNA (753bp) protein (251aa)
Putative ATP-binding component of ABC transporter n=1 Tax=Ketogulonicigenium vulgare (strain Y25) RepID=E3EY81_KETVY rbh
Peptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CDP54110.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Dev
ABC transporter ATP-binding protein
SCNpilot_expt_300_bf_scaffold_2234_6
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3282..5123)
DNA (1842bp) protein (614aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Ketogulonicigenium vulgare (strain Y25) RepID=E3EY79_KETVY rbh
Peptide ABC transporter permease {ECO:0000313|EMBL:KFL25937.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-
binding-protein-dependent transporters inner membrane component
SCNpilot_expt_300_bf_scaffold_2234_7
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5183..6778)
DNA (1596bp) protein (532aa)
Extracellular solute-binding protein family 5 n=2 Tax=Ketogulonicigenium vulgare RepID=E3EY78_KETVY rbh
Peptide ABC transporter, periplasmic peptide-binding protein {ECO:0000313|EMBL:KFC61687.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosi
family 5 extracellular solute-binding protein
SCNpilot_expt_300_bf_scaffold_2234_8
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6809..8632)
DNA (1824bp) protein (608aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicro
Putative beta-N-acetylhexosaminidase protein n=2 Tax=Ketogulonicigenium vulgare RepID=E3EY77_KETVY rbh
beta-N-acetylhexosaminidase protein
SCNpilot_expt_300_bf_scaffold_2234_9
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8767..9702
DNA (936bp) protein (312aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMA
UPI0003CE4BEA related cluster n=1 Tax=unknown RepID=UPI0003CE4BEA rbh
N-acetylmuramic acid 6-phosphate etherase
SCNpilot_expt_300_bf_scaffold_2234_10
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9819..11219
DNA (1401bp) protein (467aa)
UPI0003CEEDFD related cluster n=1 Tax=unknown RepID=UPI0003CEEDFD rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB78531.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosi
family 5 extracellular solute-binding protein
SCNpilot_expt_300_bf_scaffold_2234_11
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11388..12275
DNA (888bp) protein (296aa)
ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LWE4_RHITR
Glutathione ABC transporter permease {ECO:0000313|EMBL:KFL32742.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia ribof
glutathione ABC transporter permease
SCNpilot_expt_300_bf_scaffold_2234_12
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12275..13114
DNA (840bp) protein (280aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MGZ5_9RHIZ
Diguanylate cyclase {ECO:0000313|EMBL:KFL32743.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ABC-type dipeptide/oligopeptide/nickel transport system, permease component
SCNpilot_expt_300_bf_scaffold_2234_13
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13111..14841
DNA (1731bp) protein (577aa)
Putative peptide transport fused subunits of ABC superfamily: ATP-binding components n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F7F6_9RHIZ rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFL32744.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia ribofl
ABC transporter
SCNpilot_expt_300_bf_scaffold_2234_14
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14838..15842
DNA (1005bp) protein (335aa)
Esterase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FT81_9RHIZ rbh
Esterase {ECO:0000313|EMBL:KKB85922.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
esterase
SCNpilot_expt_300_bf_scaffold_2234_15
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15854..16720
DNA (867bp) protein (289aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {
anhydro-N-acetylmuramic acid kinase n=1 Tax=Martelella mediterranea RepID=UPI000368384C
anhydro-N-acetylmuramic acid kinase
SCNpilot_expt_300_bf_scaffold_2234_16
unknown

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17038..17352
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_2234_17
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17392..17814)
DNA (423bp) protein (141aa)
Acetyltransferase {ECO:0000313|EMBL:CDP49865.1}; EC=2.3.1.- {ECO:0000313|EMBL:CDP49865.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosi
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035C1C72
hypothetical protein
SCNpilot_expt_300_bf_scaffold_2234_18
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17811..18419)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BS0_MESSB
Uncharacterized protein {ECO:0000313|EMBL:KKB84985.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
hypothetical protein
SCNpilot_expt_300_bf_scaffold_2234_19
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18666..19292)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035E74BF rbh
Membrane protein {ECO:0000313|EMBL:KFL28137.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
putative transporter component
SCNpilot_expt_300_bf_scaffold_2234_20
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19939..20226)
DNA (288bp) protein (96aa)
Putative Rhodanese-related sulfurtransferase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZA81_AZOL4
Sulfurtransferase {ECO:0000313|EMBL:KFL28136.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
putative Rhodanese-related sulfurtransferase
SCNpilot_expt_300_bf_scaffold_2234_21
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20193..20759)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003653966
Sulfurtransferase {ECO:0000313|EMBL:KKB84987.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
thiosulfate sulfurtransferase
SCNpilot_expt_300_bf_scaffold_2234_22
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20982..21263
DNA (282bp) protein (94aa)
Uncharacterized protein {ECO:0000313|EMBL:CDP51644.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Displaying 22 items

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