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SCNpilot_expt_300_bf_scaffold_2280

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_2280_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..343
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CV17_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR78075.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_expt_300_bf_scaffold_2280_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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343..1200
DNA (858bp) protein (286aa)
Putative aga operon transcriptional repressor n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EWE1_9RHIZ rbh
Putative aga operon transcriptional repressor {ECO:0000313|EMBL:EYR78073.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinel
transcriptional repressor of aga operon
SCNpilot_expt_300_bf_scaffold_2280_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1200..3245
DNA (2046bp) protein (682aa)
Putative tagatose-6-phosphate ketose/aldose isomerase AgaS {ECO:0000313|EMBL:EYR78072.1}; EC=5.3.1.- {ECO:0000313|EMBL:EYR78072.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteri
Putative tagatose-6-phosphate ketose/aldose isomerase AgaS n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZB1_9RHIZ rbh
sugar isomerase rbh
SCNpilot_expt_300_bf_scaffold_2280_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3242..4534
DNA (1293bp) protein (431aa)
tagatose-6-phosphate kinase (EC:2.7.1.144)
D-tagatose-1,6-bisphosphate aldolase subunit KbaZ n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D415_9RHIZ rbh
D-tagatose-1,6-bisphosphate aldolase subunit KbaZ {ECO:0000313|EMBL:EYR78071.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Sh
SCNpilot_expt_300_bf_scaffold_2280_5
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4676..5398)
DNA (723bp) protein (241aa)
Threonine dehydratase {ECO:0000313|EMBL:EYD76558.1}; EC=4.3.1.19 {ECO:0000313|EMBL:EYD76558.1};; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000361D178 rbh
pyridoxal-5'-phosphate-dependent protein subunit beta
SCNpilot_expt_300_bf_scaffold_2280_6
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5591..6613)
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037D999D rbh
Succinylglutamate desuccinylase {ECO:0000313|EMBL:KGM32020.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilin
succinylglutamate desuccinylase/aspartoacylase
SCNpilot_expt_300_bf_scaffold_2280_7
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7337..7678
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036215A9
Transcriptional regulator, IclR family {ECO:0000313|EMBL:CDX24551.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Meso
SCNpilot_expt_300_bf_scaffold_2280_8
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(7861..8175)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FBU8_VERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB44748.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-
Displaying 8 items

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