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SCNpilot_expt_300_bf_scaffold_8534

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_8534_1
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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373..1134
DNA (762bp) protein (254aa)
GntR domain protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UG69_SINMW
Transcriptional regulator NanR {ECO:0000313|EMBL:CDP50779.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB00
transcriptional regulator NanR
SCNpilot_expt_300_bf_scaffold_8534_2
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1609..2727
DNA (1119bp) protein (373aa)
ABC transporter substrate-binding protein-oligopeptide transport n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CJ73_9RHOB rbh
Oligopeptide ABC transporter, periplasmic oligopep tide-binding protein OppA {ECO:0000313|EMBL:CDP50778.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicr
extracellular solute-binding protein, family 5
SCNpilot_expt_300_bf_scaffold_8534_3
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2814..3776
DNA (963bp) protein (321aa)
ABC transporter membrane-spanning permease-oligopeptide transport n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CJ72_9RHOB rbh
Peptide ABC transporter permease {ECO:0000313|EMBL:KKC37282.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epiderm
dipeptide/oligopeptide/nickel ABC transporter permease
SCNpilot_expt_300_bf_scaffold_8534_4
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3779..3943
DNA (165bp) protein (55aa)
Peptide ABC transporter permease {ECO:0000313|EMBL:KFL26338.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-
SCNpilot_expt_300_bf_scaffold_8534_5
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3979..4677
DNA (699bp) protein (233aa)
ABC transporter membrane-spanning permease-oligopeptide transport n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CJ71_9RHOB rbh
Peptide ABC transporter permease {ECO:0000313|EMBL:KFL26338.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-
dipeptide/oligopeptide/nickel ABC transporter permease
SCNpilot_expt_300_bf_scaffold_8534_6
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4683..5660
DNA (978bp) protein (326aa)
Oligopeptide ABC transporter, ATP-binding protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CJ70_9RHOB
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFL26339.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devo
oligopeptide/dipeptide ABC transporter ATP-binding protein
SCNpilot_expt_300_bf_scaffold_8534_7
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5644..6684
DNA (1041bp) protein (347aa)
Oligopeptide ABC transporter ATP-binding protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CJ69_9RHOB
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB12124.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devos
oligopeptide/dipeptide ABC transporter ATP-binding protein
SCNpilot_expt_300_bf_scaffold_8534_8
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6717..6926
DNA (210bp) protein (70aa)
N-acetylneuraminate lyase {ECO:0000313|EMBL:CDP50773.1}; EC=4.1.3.3 {ECO:0000313|EMBL:CDP50773.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae
N-acetylneuraminate lyase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6Q3_CLOBU
dihydrodipicolinate synthase/N-acetylneuraminate lyase
Displaying 8 items

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