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SCNpilot_expt_300_bf_scaffold_4283

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_4283_1
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..320
DNA (318bp) protein (106aa)
UPI0003CE8F48 related cluster n=1 Tax=unknown RepID=UPI0003CE8F48
Uncharacterized protein {ECO:0000313|EMBL:ESY89224.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
SCNpilot_expt_300_bf_scaffold_4283_2
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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334..1137
DNA (804bp) protein (268aa)
Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2Q964_9BRAD rbh
Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase {ECO:0000313|EMBL:EIG56320.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhi
hypothetical protein
SCNpilot_expt_300_bf_scaffold_4283_3
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1417..2055)
DNA (639bp) protein (213aa)
GntR family transcriptional regulator n=1 Tax=Nitratireductor indicus C115 RepID=K2PAM4_9RHIZ
GntR family transcriptional regulator {ECO:0000313|EMBL:EKF44181.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="N
GntR domain protein
SCNpilot_expt_300_bf_scaffold_4283_4
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2374..3060
DNA (687bp) protein (229aa)
PREDICTED: probable 4-hydroxy-2-oxoglutarate aldolase, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C11712 rbh
Dihydrodipicolinate synthase {ECO:0000313|EMBL:ESY79815.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobiu
dihydrodipicolinate synthetase
SCNpilot_expt_300_bf_scaffold_4283_5
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

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comp(3238..4251)
DNA (1014bp) protein (338aa)
Peptide/nickel transport system ATP-binding protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5S9Y9_9BACT
Peptide/nickel transport system ATP-binding protein {ECO:0000313|EMBL:BAL59243.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophic
oligopeptide/dipeptide ABC transporter ATPase
SCNpilot_expt_300_bf_scaffold_4283_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4248..5285)
DNA (1038bp) protein (346aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LG76_9BACL rbh
Peptide ABC transporter ATPase {ECO:0000313|EMBL:KKB09883.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatens
oligopeptide/dipeptide ABC transporter ATPase
SCNpilot_expt_300_bf_scaffold_4283_7
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(5282..6364)
DNA (1083bp) protein (361aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NLY4_ROSCS rbh
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABU58532.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflex
SCNpilot_expt_300_bf_scaffold_4283_8
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6361..7347)
DNA (987bp) protein (329aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CF67_DESTA rbh
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AJY45896.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophyti
SCNpilot_expt_300_bf_scaffold_4283_9
Dictyoglomus turgidum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

comp(7407..8960)
DNA (1554bp) protein (518aa)
Extracellular solute-binding protein family 5 n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E3A1_DICTD rbh
family 5 extracellular solute-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ACK42975.1}; Flags: Precursor;; TaxID=515635 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Di
SCNpilot_expt_300_bf_scaffold_4283_10
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8957..9184)
DNA (228bp) protein (76aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL30482.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCNpilot_expt_300_bf_scaffold_4283_11
RLO_PLX_64_10, Bacteria

Not on your lists

comp(9450..10538)
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B69D4E rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Prabable sialidase
Displaying 11 items

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