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SCNpilot_expt_300_bf_scaffold_4890

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_4890_1
Actinobacillus minor, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..436)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00037B2B4A
Possible LPS sugar transferase {ECO:0000313|EMBL:EEF16047.1}; TaxID=591023 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Actinobacillus.;" source="Actinobaci
LPS sugar transferase
SCNpilot_expt_300_bf_scaffold_4890_2
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1005..2690)
DNA (1686bp) protein (562aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGW8_PELHB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ53121.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium
SCNpilot_expt_300_bf_scaffold_4890_3
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2780..3538)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00037DFB96
Serine/threonine protein phosphatase I {ECO:0000313|EMBL:KFC62705.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia s
serine/threonine protein phosphatase I
SCNpilot_expt_300_bf_scaffold_4890_4
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3531..4925)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGX0_PELHB rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ53123.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium
SCNpilot_expt_300_bf_scaffold_4890_5
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4946..5653)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGX1_PELHB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ53124.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium
SCNpilot_expt_300_bf_scaffold_4890_6
unknown

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5837..6256
DNA (420bp) protein (140aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_4890_7
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6369..7493)
DNA (1125bp) protein (375aa)
Transcriptional regulator/sugar kinase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KJJ6_MESAW rbh
ROK family transcriptional regulator {ECO:0000313|EMBL:KFL30019.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia ribof
transcriptional regulator/sugar kinase
SCNpilot_expt_300_bf_scaffold_4890_8
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7685..8695)
DNA (1011bp) protein (337aa)
Putative phosphosugar isomerase n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0UUD5_RHILV rbh
Glucosamine--fructose-6-phosphate aminotransferase {ECO:0000313|EMBL:EWY40048.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella
hypothetical protein
SCNpilot_expt_300_bf_scaffold_4890_9
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8886..10160
DNA (1275bp) protein (425aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11CE6_MESSB rbh
Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein {ECO:0000313|EMBL:EYD77398.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacteral
extracellular solute-binding protein
SCNpilot_expt_300_bf_scaffold_4890_10
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10224..10622
DNA (399bp) protein (133aa)
ABC sugar transporter, inner membrane subunit n=4 Tax=Rhodobacter sphaeroides RepID=B9KR73_RHOSK
N-Acetyl-D-glucosamine ABC transport system, permease protein 1 {ECO:0000313|EMBL:EYD77399.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; R
binding-protein-dependent transport system inner membrane protein
Displaying 10 items

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