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SCNpilot_expt_300_bf_scaffold_6132

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_6132_1
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(54..830)
DNA (777bp) protein (259aa)
conjugal transfer protein TrbJ n=1 Tax=Paracoccus sp. TRP RepID=UPI000225FC56
Putative conjugal transfer protein trbJ {ECO:0000313|EMBL:CDX24325.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
conjugal transfer protein TrbJ
SCNpilot_expt_300_bf_scaffold_6132_2
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(827..2104)
DNA (1278bp) protein (426aa)
Conjugal transfer ATPase TrbE n=1 Tax=Nitratireductor indicus C115 RepID=K2PI37_9RHIZ
Conjugal transfer protein trbE {ECO:0000313|EMBL:CDX24328.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobiu
conjugal transfer ATPase TrbE
SCNpilot_expt_300_bf_scaffold_6132_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2061..3263)
DNA (1203bp) protein (401aa)
ATPase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FW6_MESSB
Conjugal transfer protein trbE {ECO:0000313|EMBL:CDX24328.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobiu
conjugal transfer ATPase TrbE
SCNpilot_expt_300_bf_scaffold_6132_4
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3273..3536)
DNA (264bp) protein (88aa)
Type IV secretory pathway, TrbD component n=2 Tax=Bradyrhizobium RepID=H5Y911_9BRAD
Type IV secretory pathway TrbD component {ECO:0000313|EMBL:CDX24330.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Me
conjugal transfer protein trbB
SCNpilot_expt_300_bf_scaffold_6132_5
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3536..3868)
DNA (333bp) protein (111aa)
conjugal transfer protein TrbC n=1 Tax=Afipia birgiae RepID=UPI000314BDB5
Conjugal transfer protein TrbC {ECO:0000313|EMBL:CDX24333.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobiu
conjugal transfer protein TrbC
SCNpilot_expt_300_bf_scaffold_6132_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3865..4806)
DNA (942bp) protein (314aa)
P-type conjugative transfer ATPase TrbB n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HY35_9RHIZ
Conjugal transfer protein trbB {ECO:0000313|EMBL:CDX24335.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobiu
P-type conjugative transfer ATPase TrbB
SCNpilot_expt_300_bf_scaffold_6132_7
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4973..5368)
DNA (396bp) protein (132aa)
CopG family transcripitonal regulator n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002ED4ECB
Uncharacterized protein {ECO:0000313|EMBL:CDX24338.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
hypothetical protein
SCNpilot_expt_300_bf_scaffold_6132_8
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5684..7114
DNA (1431bp) protein (477aa)
Putative DNA coupling protein (Fragment) n=1 Tax=Ralstonia pickettii RepID=B6VNU7_RALPI rbh
Putative DNA coupling protein {ECO:0000313|EMBL:CAR85894.1}; Flags: Fragment;; TaxID=329 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="
MerR family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_6132_9
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7540..7800
DNA (261bp) protein (87aa)
HNS-type DNA binding protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89B54_BRADU
Histidyl-tRNA synthetase {ECO:0000313|EMBL:KKC31477.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hupT; HNS-type DNA binding protein
SCNpilot_expt_300_bf_scaffold_6132_10
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7817..9589)
DNA (1773bp) protein (591aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F263_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX24345.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
hypothetical protein
SCNpilot_expt_300_bf_scaffold_6132_11
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9750..10502)
DNA (753bp) protein (251aa)
lytic transglycosylase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003600246
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:CDX24347.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizo
lytic transglycosylase catalytic
SCNpilot_expt_300_bf_scaffold_6132_12
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10506..10853)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4G6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CDX24350.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
hypothetical protein
SCNpilot_expt_300_bf_scaffold_6132_13
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10887..11123)
DNA (237bp) protein (79aa)
Conjugation peptidase TraF. Serine peptidase. MEROPS family S26C n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BL3_MESSB
Conjugation peptidase TraF. Serine peptidase. MEROPS family S26C {ECO:0000313|EMBL:CDX24352.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mes
TraF peptidase
Displaying 13 items

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