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SCNpilot_expt_300_bf_scaffold_6374

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_6374_1
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..521)
DNA (519bp) protein (173aa)
Choline dehydrogenase-like flavoprotein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YNY8_9RHIZ
Choline dehydrogenase-like flavoprotein {ECO:0000313|EMBL:EIM25680.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Micr
glucose-methanol-choline oxidoreductase
SCNpilot_expt_300_bf_scaffold_6374_2
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1101..1382
DNA (282bp) protein (94aa)
PAS sensor protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F9U7_9RHIZ
PAS sensor protein {ECO:0000313|EMBL:EHS50391.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="R
SCNpilot_expt_300_bf_scaffold_6374_3
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1398..2279)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00037E8667 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL28949.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Dienelactone hydrolase family protein
SCNpilot_expt_300_bf_scaffold_6374_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2281..2760)
DNA (480bp) protein (160aa)
Transcriptional regulator, AsnC family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF44_PELHB
ArsR family transcriptional regulator {ECO:0000313|EMBL:KKB10234.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chi
transcriptional regulator, AsnC family
SCNpilot_expt_300_bf_scaffold_6374_5
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2763..3488)
DNA (726bp) protein (242aa)
Nuclease (SNase domain protein) n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J7E2_HYPSM
nuclease
Nuclease (SNase domain protein) {ECO:0000313|EMBL:CCB67255.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicro
SCNpilot_expt_300_bf_scaffold_6374_6
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3600..5132
DNA (1533bp) protein (511aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; De
Signal transduction histidine kinase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF43_PELHB rbh
signal transduction histidine kinase
SCNpilot_expt_300_bf_scaffold_6374_7
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5217..5858
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037240FB rbh
class III aminotransferase Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
class III aminotransferase
SCNpilot_expt_300_bf_scaffold_6374_8
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5905..6522
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037240FB
class III aminotransferase Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
class III aminotransferase
Displaying 8 items

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