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SCNpilot_expt_300_bf_scaffold_1965_6

Organism: SCNPILOT_EXPT_300_BF_Devosia_66_6_partial

partial RP 7 / 55 BSCG 5 / 51 ASCG 4 / 38
Location: 2699..3304

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate is similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 201.0
  • Bit_score: 374
  • Evalue 9.10e-101
3-isopropylmalate dehydratase small subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6D3_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 201.0
  • Bit_score: 354
  • Evalue 7.00e-95
  • rbh
3-isopropylmalate dehydratase small subunit similarity KEGG
DB: KEGG
  • Identity: 82.1
  • Coverage: 201.0
  • Bit_score: 354
  • Evalue 2.00e-95

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Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGGAAAAGTTCACCAGCCTGACGGGCGTCGCCGCGCCGCTGCCGATCATCAACATCGACACGGACATGATCATTCCCAAGCAGTACCTCAAGACCATCAAGCGCACCGGGCTTGGCACCGCCCTGTTCTCCGAGATGCGCTACAATGAAGATGGTTCGGAGAACCCCGACTTCGTGCTCAACAAGCCGGCCTATCGGCAGGCCAAGATCATCGTCGCCGGCGACAATTTCGGCTGCGGCTCGTCGCGCGAACACGCCCCCTGGGCGCTCCTGGATTTCGGCGTGCGCTGCGTGATCTCCACCAGCTTCGCCGACATCTTCTACAATAACTGCTTCAAGAACGGCATCCTGCCGATCGTGGTGACGCCCGAACAGCTGGCGCTGCTGATGGACGATGCCGAGCGCGGCTCGAACGCGACGATCAGCGTCGACCTCGAAAGCCAGACGATCAAGGGGCCGGATGGCGGTTCGCTCCACTTCGATATCGATCCCTCGCGCAAGCAGACGCTGCTCGAAGGGCTCGACGACATCGCGACGACGCTGAAGGCAGATCCGGCGATTTCAGGGTTCGAGAAAAAGATGGGCCAGGACCGGCCCTGGCTCTGA
PROTEIN sequence
Length: 202
MEKFTSLTGVAAPLPIINIDTDMIIPKQYLKTIKRTGLGTALFSEMRYNEDGSENPDFVLNKPAYRQAKIIVAGDNFGCGSSREHAPWALLDFGVRCVISTSFADIFYNNCFKNGILPIVVTPEQLALLMDDAERGSNATISVDLESQTIKGPDGGSLHFDIDPSRKQTLLEGLDDIATTLKADPAISGFEKKMGQDRPWL*