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SCNpilot_expt_300_bf_scaffold_1965

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1965_1
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..209
DNA (207bp) protein (69aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VTT8_RHILT
NAD-dependent nucleoside-diphosphate-sugar epimerase protein
NAD-dependent nucleoside-diphosphate-sugar epimerase protein {ECO:0000313|EMBL:AIC27957.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/A
SCNpilot_expt_300_bf_scaffold_1965_2
unknown

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246..413
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1965_3
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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636..1583
DNA (948bp) protein (316aa)
Thioredoxin domain-containing protein EC-YbbN n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4QW23_9RHIZ
Thioredoxin {ECO:0000313|EMBL:KKB06891.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
thioredoxin
SCNpilot_expt_300_bf_scaffold_1965_4
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1642..2307
DNA (666bp) protein (222aa)
Uncharacterized protein, similar to the N-terminal domain of Lon protease n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7N7_PELHB
Peptidase S16 {ECO:0000313|EMBL:KKB81941.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1965_5
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2304..2552
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7N8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC33018.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1965_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2699..3304
DNA (606bp) protein (202aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate is
3-isopropylmalate dehydratase small subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6D3_PELHB rbh
3-isopropylmalate dehydratase small subunit
SCNpilot_expt_300_bf_scaffold_1965_7
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3315..3704
DNA (390bp) protein (130aa)
Putative translation initiation inhibitor, yjgF family n=1 Tax=Rhizobium sp. CF080 RepID=J2JAU6_9RHIZ
Endoribonuclease L-PSP {ECO:0000313|EMBL:KEQ09039.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
Endoribonuclease L-PSP
SCNpilot_expt_300_bf_scaffold_1965_8
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3965..5173
DNA (1209bp) protein (403aa)
Glutamate dehydrogenase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SE68_9RHIZ rbh
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;
glutamate dehydrogenase
Displaying 8 items

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