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SCNpilot_expt_300_bf_scaffold_6514_5

Organism: SCNPILOT_EXPT_300_BF_Rhodospirillales_66_5_fragment

partial RP 25 / 55 BSCG 21 / 51 ASCG 2 / 38
Location: comp(2801..3649)

Top 3 Functional Annotations

Value Algorithm Source
dapF; diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 278.0
  • Bit_score: 452
  • Evalue 4.80e-124
dapF; diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 284.0
  • Bit_score: 331
  • Evalue 1.90e-88
Diaminopimelate epimerase n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2M930_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 284.0
  • Bit_score: 334
  • Evalue 1.40e-88
  • rbh

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 849
ATGGCCGGAACGCCTTTTCTCAAGATGCATGGGCTGGGCAACGATTTTGTCGTGCTCGATGCGCGGATCAGCAAGCTCGATCTGACGCCGCCGCGCCGGCGCGCCATCGCCGATCGCCGGCTGGGCGTGGGCTGCGACCAGCTGATCGTGCTGGAGCCACCGACCGAGGGCGACGCCGACGTGTTCATGCGCATCTACAATCCCGACGGCACGGAGGCCCAGGCCTGCGGCAACGCCACGCGCTGCGTTGCCTCGGTGGTCATGGATGAGCTCAAGGCCGAGGAAGCGACCATCCAGACGATCGCCGGCCTGCTCGAATCGCAGAAGGTCGGCCGCGGCGCCAACGGCCTGCCGGTGATTTCCGTCGACATGGGACTGGTGCGCATGGACTGGCGCGAGATCCCGGTCGCCAAGGCCTGCGATACCAACCGCATGCCGGTCGGCATCGGTCCGCTACAGGAGCCGGTCGGCACCAACGTGGGCAATCCGCACGCGACCTTCTTCGTCGATGACCTGGCCGCGATCCCGATCACCGAGTTGGGGCCGAAGCTAGAGCACGATCCGTTCTTTCCCGAGCGCGTGAACGTCGGCGTGGCCCAGGTCATCGGTGAGAACAAGGTGAAGCTCAACGTCTGGGAACGCGGCGCGGGGCTGACGCTCGCCTGCGGATCGGGCGCGTGTGCGGCCGGCGTGGCCGCGGCGCGGCGCAGGCTCACCGGCCGCAAGGTCGATGTCGTCGTCGAGCACGGCACGCTCACCATCGAGTGGTTGCACGACGACCACGTGTCGATGACCGGCGGTATCGCGCTCGCTTACAGGGGCGAACTCGACCGTTCGCTGCTTTCCTGA
PROTEIN sequence
Length: 283
MAGTPFLKMHGLGNDFVVLDARISKLDLTPPRRRAIADRRLGVGCDQLIVLEPPTEGDADVFMRIYNPDGTEAQACGNATRCVASVVMDELKAEEATIQTIAGLLESQKVGRGANGLPVISVDMGLVRMDWREIPVAKACDTNRMPVGIGPLQEPVGTNVGNPHATFFVDDLAAIPITELGPKLEHDPFFPERVNVGVAQVIGENKVKLNVWERGAGLTLACGSGACAAGVAAARRRLTGRKVDVVVEHGTLTIEWLHDDHVSMTGGIALAYRGELDRSLLS*