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SCNpilot_expt_300_bf_scaffold_6514

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_6514_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..409
DNA (408bp) protein (136aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cbbK; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HHG1_9PROT
SCNpilot_expt_300_bf_scaffold_6514_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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421..1041
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI000363E866
NUDIX hydrolase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_6514_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1064..1660)
DNA (597bp) protein (199aa)
Probable intracellular septation protein A n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I3B8_RHOVT
intracellular septation protein A; K06190 intracellular septation protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
intracellular septation protein A
SCNpilot_expt_300_bf_scaffold_6514_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1657..2799)
DNA (1143bp) protein (381aa)
Signal recognition particle receptor FtsY n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NSZ2_AZOS1 rbh
ftsY; signal recognition particle receptor; K03110 fused signal recognition particle receptor Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ftsY; signal recognition particle receptor
SCNpilot_expt_300_bf_scaffold_6514_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2801..3649)
DNA (849bp) protein (283aa)
dapF; diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2M930_9PROT rbh
SCNpilot_expt_300_bf_scaffold_6514_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3677..4516)
DNA (840bp) protein (280aa)
Glycosyl transferase family 2 n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UDC8_9CYAN
glycosyl transferase family 2 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
glycosyl transferase family 2
SCNpilot_expt_300_bf_scaffold_6514_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4590..5192
DNA (603bp) protein (201aa)
2-Hydroxychromene-2-carboxylate isomerase n=1 Tax=alpha proteobacterium BAL199 RepID=A8U169_9PROT
DSBA oxidoreductase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
DSBA oxidoreductase
SCNpilot_expt_300_bf_scaffold_6514_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5340..5870)
DNA (531bp) protein (177aa)
Abortive infection protein n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RT61_9PLAN
Abortive infection protein; K07052 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
CAAX protease
SCNpilot_expt_300_bf_scaffold_6514_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6177..7514
DNA (1338bp) protein (446aa)
Signal recognition particle protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z325_AZOL4
ffh; GTPase of the signal recognition particle; K03106 signal recognition particle subunit SRP54 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
RNA-binding protein
SCNpilot_expt_300_bf_scaffold_6514_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7572..7946
DNA (375bp) protein (125aa)
30S ribosomal protein S16 n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AIB6_AZOBR
rpsP; 30S ribosomal protein S16 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
rpsP; 30S ribosomal protein S16
SCNpilot_expt_300_bf_scaffold_6514_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7946..8440
DNA (495bp) protein (165aa)
Ribosome maturation factor RimM n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=RIMM_PARL1
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
rimM; 16S rRNA-processing protein RimM
Displaying 11 items

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