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SCNpilot_expt_300_bf_scaffold_6514_11

Organism: SCNPILOT_EXPT_300_BF_Rhodospirillales_66_5_fragment

partial RP 25 / 55 BSCG 21 / 51 ASCG 2 / 38
Location: 7946..8440

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=RIMM_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 166.0
  • Bit_score: 166
  • Evalue 1.70e-38
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 165.0
  • Bit_score: 288
  • Evalue 7.10e-75
rimM; 16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 166.0
  • Bit_score: 166
  • Evalue 4.80e-39

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 495
ATGAAGGACGGCCGCGTCCTGCTGGGCGTCGTCGCGGCGCCGCACGGCGTACGCGGCCTGGTGCGCATCAGGAGCTTCACCGAGGATCCGATGGATATCGCCGCCTACGGCGAGCTATCGGACGAAACGGGGAAGAAGCGGTTCCGGGTCGAGGCTCTGAGCGCCGTCAAAGGCGCAGTCCTCGCCCGGCTGGAGGGCGTAGCCGATCGAACGGCGGCCGAGGCAGTACGGGGCTTGCGGCTCTATGTGGAGCGCGAGCGTCTGCCGGCGACGGGCGAGCGGGAGTGGTACGAGGCGGACCTGATCGGTCTCGCCGCGGTCGGCCGGGACGGCCGGGATTGGGGGAAGGTGATGGCCTTCCACGATTTCGGCGCCGGGTCGACGATGGAAGTGTCGGGAGGCAGCGCATCGAGGCATTCGGTGATGTTGCCCTTCACCGACGAGGCCGTGCCCGAGATCGATGTCCCGGGCGGCAAGATTGTGGTCGATCCACCG
PROTEIN sequence
Length: 165
MKDGRVLLGVVAAPHGVRGLVRIRSFTEDPMDIAAYGELSDETGKKRFRVEALSAVKGAVLARLEGVADRTAAEAVRGLRLYVERERLPATGEREWYEADLIGLAAVGRDGRDWGKVMAFHDFGAGSTMEVSGGSASRHSVMLPFTDEAVPEIDVPGGKIVVDPP