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SCNpilot_expt_300_bf_scaffold_5011_4

Organism: SCNPILOT_EXPT_300_BF_Rhodospirillales_66_5_fragment

partial RP 25 / 55 BSCG 21 / 51 ASCG 2 / 38
Location: comp(3476..4324)

Top 3 Functional Annotations

Value Algorithm Source
Farnesyl diphosphate synthase {ECO:0000313|EMBL:CBS90031.1}; EC=2.5.1.1 {ECO:0000313|EMBL:CBS90031.1};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospir similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 300.0
  • Bit_score: 312
  • Evalue 6.00e-82
Farnesyl diphosphate synthase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZF44_AZOL4 similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 300.0
  • Bit_score: 312
  • Evalue 4.30e-82
ispA; farnesyl diphosphate synthase similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 300.0
  • Bit_score: 312
  • Evalue 1.20e-82

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Taxonomy

Azospirillum lipoferum → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 849
ATGCCCCTATCGTCGTACCGTGATTTCGGTGCCGCCCTGACTTTTGCGGCGGATTCCGTCGAGCACACCATGGAACGCCTCCTGCCGTCGGGCGATTCGGGCGAAGCCCGTGTCTTCGAGGCGATGCGCTATTCGAGCCTGGGGGGCGGCAAGCGGTTGCGCGCCTTTTTCGTGCTGGCCACCTCGACCCTGTTCAAGGTCGGCAGGCTGCCGGCATTGCGCACCGCCAGCGCCATCGAGCTGATCCATGCCTATTCGCTGATCCACGACGATCTGCCGGCGATGGACGACGACGACCTGCGTCGCGGCAAGCCCTCGTGCCACAAGCAGTTCGACGAGGCGACGGCAATCCTGGCGGGTGATGCGCTGCAGGCGCTGGCGTTCGAGGTCCTTGCCCACGAAGACACGCACGGCGATCCCGCCGTCCGGACGGCCCTCATCACCGAGCTCGCACGGGCCTCCGGTGCACAGGGGATGGGGGGCGGTCAGATGCTCGACCTGCTGGCCGAGGAGCGGGCGGAAGTGGGCGGCGAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCACTTGCCGCCTACGCGCATGATGTCGGGCTCGCCTTCCAAATCGCCGACGATCTACTTGACGTTGAAGGCAGCGCAGCCGAAATCGGTAAGACACCGGGCAAGGACGCCGCGGCCGGCAAGGCCACGTTCGTGTCGATCCTGGGCGTGGAGCGGGCGCGGGCACAAGCCGACCTGCTGGCGCGACAGGCGGCCGCGCACCTGGAGCCGTTCGGGGCGGCTGCGGACTTGCTAAAACAGGCGGCTAAATTCGTGGTTGCCCGTCGTTCGTGA
PROTEIN sequence
Length: 283
MPLSSYRDFGAALTFAADSVEHTMERLLPSGDSGEARVFEAMRYSSLGGGKRLRAFFVLATSTLFKVGRLPALRTASAIELIHAYSLIHDDLPAMDDDDLRRGKPSCHKQFDEATAILAGDALQALAFEVLAHEDTHGDPAVRTALITELARASGAQGMGGGQMLDLLAEERAEVGGEXXXXXXXXXXXXXXALAAYAHDVGLAFQIADDLLDVEGSAAEIGKTPGKDAAAGKATFVSILGVERARAQADLLARQAAAHLEPFGAAADLLKQAAKFVVARRS*