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SCNpilot_expt_300_bf_scaffold_5011

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_5011_1
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..594)
DNA (594bp) protein (198aa)
Uncharacterized protein {ECO:0000313|EMBL:EWS52603.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
Uncharacterized protein id=3779679 bin=GWA2_Methylomirabilis_73_35 species=Zea mays genus=Zea taxon_order=Poales taxon_class=Liliopsida phylum=Streptophyta tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
SCNpilot_expt_300_bf_scaffold_5011_2
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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685..1383
DNA (699bp) protein (233aa)
amidase (EC:3.5.1.4)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IUD0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF86504.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
SCNpilot_expt_300_bf_scaffold_5011_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1520..3436)
DNA (1917bp) protein (639aa)
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AP34_AZOBR rbh
dxs2; 1-deoxy-D-xylulose 5-phosphate synthase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_expt_300_bf_scaffold_5011_4
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3476..4324)
DNA (849bp) protein (283aa)
Farnesyl diphosphate synthase {ECO:0000313|EMBL:CBS90031.1}; EC=2.5.1.1 {ECO:0000313|EMBL:CBS90031.1};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospir
Farnesyl diphosphate synthase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZF44_AZOL4
ispA; farnesyl diphosphate synthase
SCNpilot_expt_300_bf_scaffold_5011_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4334..4588)
DNA (255bp) protein (85aa)
xseB; Exonuclease VII small subunit; K03602 exodeoxyribonuclease VII small subunit [EC:3.1.11.6] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00035D1BAA
xseB; Exonuclease VII small subunit
SCNpilot_expt_300_bf_scaffold_5011_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4880..5788
DNA (909bp) protein (303aa)
Transcriptional regulator, IclR family n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9R1Q1_9DELT
IclR family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
transcriptional regulator
SCNpilot_expt_300_bf_scaffold_5011_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5914..6225
DNA (312bp) protein (104aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_expt_300_bf_scaffold_5011_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6226..6576)
DNA (351bp) protein (117aa)
Putative 5-amino-6-(5-phosphoribosylamino) uracil reductase n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZCK4_9BRAD
putative 5-amino-6-(5-phosphoribosylamino) uracil reductase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
putative 5-amino-6-(5-phosphoribosylamino) uracil reductase
Displaying 8 items

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