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SCNpilot_expt_300_bf_scaffold_321

Search features with annotation key words

Displaying items 1-30 of 126 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_321_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(339..845)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003824AE0
DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
DNA repair protein
SCNpilot_expt_300_bf_scaffold_321_2

Not on your lists

comp(1236..2057)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Pseudomonas aeruginosa RepID=UPI0002F5E548 rbh
Uncharacterized protein {ECO:0000313|EMBL:EQD55425.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_321_3
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2086..3369)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Ralstonia solanacearum FQY_4 RepID=M4UEJ8_RALSL rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH83607.1}; TaxID=1262456 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacear
SCNpilot_expt_300_bf_scaffold_321_4
unknown

Not on your lists

3754..4125
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_321_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4203..4679
DNA (477bp) protein (159aa)
Uncharacterized protein n=4 Tax=Proteobacteria RepID=S2WT71_DELAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD42556.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
SCNpilot_expt_300_bf_scaffold_321_6
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4796..7645
DNA (2850bp) protein (950aa)
N-6 DNA methylase n=1 Tax=Pseudomonas stutzeri KOS6 RepID=K6CNW9_PSEST
N-6 DNA methylase {ECO:0000313|EMBL:EWC41217.1}; TaxID=1218352 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri KO
N-6 DNA methylase
SCNpilot_expt_300_bf_scaffold_321_7
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7642..8328
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa MH27 RepID=V6AK68_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:EWC41218.1}; TaxID=1218352 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutz
hypothetical protein
SCNpilot_expt_300_bf_scaffold_321_8
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8426..9340)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI00023761FE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF08445.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidu
SCNpilot_expt_300_bf_scaffold_321_9

Not on your lists

comp(9337..10074)
DNA (738bp) protein (246aa)
hypothetical protein id=12495408 bin=THIO_HI species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_HI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:CBH97481.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_321_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10604..11848
DNA (1245bp) protein (415aa)
Putative transmembrane protein id=1320296 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
putative transmembrane protein; K07007 Tax=GWE1_Thiobacillus_62_9_curated
transmembrane protein
SCNpilot_expt_300_bf_scaffold_321_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11832..13490
DNA (1659bp) protein (553aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000363229A rbh
putative FAD-dependent dehydrogenase; K07137 Tax=GWE1_Thiobacillus_62_9_curated
FAD-dependent dehydrogenase
SCNpilot_expt_300_bf_scaffold_321_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13600..13956
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000373C9BA
arsR; arsenical resistance operon repressor Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
arsR; arsenical resistance operon repressor
SCNpilot_expt_300_bf_scaffold_321_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13953..14426
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000367147D rbh
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_expt_300_bf_scaffold_321_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14457..14888
DNA (432bp) protein (144aa)
protein tyrosine phosphatase; K03741 arsenate reductase [EC:1.20.4.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
protein tyrosine phosphatase n=1 Tax=Thiobacillus thioparus RepID=UPI0003619D35
protein tyrosine phosphatase
SCNpilot_expt_300_bf_scaffold_321_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14906..15403
DNA (498bp) protein (166aa)
arsC1; putative arsenate reductase (glutaredoxin) (EC:1.20.4.1); K03741 arsenate reductase [EC:1.20.4.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003661420
arsenate reductase
SCNpilot_expt_300_bf_scaffold_321_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15432..16520
DNA (1089bp) protein (363aa)
arsenic transporter n=1 Tax=Thiobacillus thioparus RepID=UPI00037A6957 rbh
ACR3 family arsenite transporter
Putative arsenite transporter, ACR3 family {ECO:0000313|EMBL:AAZ97379.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sou
SCNpilot_expt_300_bf_scaffold_321_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16486..16977
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000362315F
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_321_18
GWF2_Sideroxydans_59_14_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16991..17914
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000380BB26 rbh
beta-lactamase domain-containing protein Tax=GWF2_Sideroxydans_59_14_curated
beta-lactamase domain-containing protein
SCNpilot_expt_300_bf_scaffold_321_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18073..19803
DNA (1731bp) protein (577aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035FD01B
diguanylate cyclase/phosphodiesterase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
diguanylate cyclase
SCNpilot_expt_300_bf_scaffold_321_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19757..22048
DNA (2292bp) protein (764aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035FD01B
diguanylate cyclase/phosphodiesterase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
diguanylate cyclase/phosphodiesterase
SCNpilot_expt_300_bf_scaffold_321_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22210..23613)
DNA (1404bp) protein (468aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17) rbh
Glutamate--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000255|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00022}; Short=GluRS {ECO:0000255|HAMAP-Rul
glutamyl-tRNA synthetase n=1 Tax=Thiobacillus thioparus RepID=UPI0003823A79 rbh
SCNpilot_expt_300_bf_scaffold_321_22
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23887..25329
DNA (1443bp) protein (481aa)
ATP-dependent RNA helicase RhlE {ECO:0000256|HAMAP-Rule:MF_00968}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00968};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales
RNA helicase n=1 Tax=Thiobacillus thioparus RepID=UPI00037D14C6 rbh
DEAD/DEAH box helicase
SCNpilot_expt_300_bf_scaffold_321_23
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25541..26845
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003627716
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97685.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
SCNpilot_expt_300_bf_scaffold_321_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26847..27344)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036F5E8F rbh
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_321_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27397..28143)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037FD12A rbh
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_321_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28169..29566)
DNA (1398bp) protein (466aa)
phosphate starvation protein PhoH n=1 Tax=Thiobacillus thioparus RepID=UPI00036C1E19 rbh
nucleotide binding protein; K07175 PhoH-like ATPase Tax=GWE1_Thiobacillus_62_9_curated
nucleotide binding protein
SCNpilot_expt_300_bf_scaffold_321_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29736..30182
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003820B9B
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_321_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30222..30911
DNA (690bp) protein (230aa)
glycoprotease; K14742 hypothetical protease [EC:3.4.-.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
glycoprotease n=1 Tax=Thiobacillus thioparus RepID=UPI00037E5700 rbh
glycoprotease rbh
SCNpilot_expt_300_bf_scaffold_321_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30908..31375
DNA (468bp) protein (156aa)
30S ribosomal protein S18P alanine acetyltransferase (EC:2.3.1.-); K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
30S ribosomal protein S18 (EC:2.3.1.-)
alanine acetyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00037DA688 rbh
SCNpilot_expt_300_bf_scaffold_321_30
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31369..32031
DNA (663bp) protein (221aa)
putative phage DNA polymerase; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
DNA polymerase n=1 Tax=Thiobacillus thioparus RepID=UPI00036D7FFF rbh
phage DNA polymerase
Displaying items 1-30 of 126 in total

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