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SCNpilot_expt_300_bf_scaffold_562

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_562_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..944)
DNA (942bp) protein (314aa)
protease TldD n=1 Tax=Thiobacillus thioparus RepID=UPI00037C04CB
modulator of DNA gyrase
Putative modulator of DNA gyrase {ECO:0000313|EMBL:AAZ96465.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiob
SCNpilot_expt_300_bf_scaffold_562_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(959..1924)
DNA (966bp) protein (322aa)
carbon-nitrogen hydrolase; K01501 nitrilase [EC:3.5.5.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
carbon-nitrogen hydrolase; K01501 nitrilase [EC:3.5.5.1] id=12493790 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
carbon-nitrogen hydrolase
SCNpilot_expt_300_bf_scaffold_562_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1940..4273)
DNA (2334bp) protein (778aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036EAC66
Uncharacterized protein {ECO:0000313|EMBL:AAZ96463.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sou
hypothetical protein
SCNpilot_expt_300_bf_scaffold_562_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4231..5673)
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036EAC66
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96463.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sou
SCNpilot_expt_300_bf_scaffold_562_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5754..6041)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037C3280
RNA-binding S4 protein; K04762 ribosome-associated heat shock protein Hsp15 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RNA-binding S4 protein
SCNpilot_expt_300_bf_scaffold_562_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6077..6982)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037DC0DB rbh
transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
transcriptional regulator
SCNpilot_expt_300_bf_scaffold_562_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7095..7793
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037285E1 rbh
Pirin domain-containing protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Pirin domain-containing protein
SCNpilot_expt_300_bf_scaffold_562_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7863..8444
DNA (582bp) protein (194aa)
FMN reductase n=1 Tax=Thiobacillus thioparus RepID=UPI000370E382 rbh
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_562_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8505..8723)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036DA23E
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_300_bf_scaffold_562_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9047..9436)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036BEDAB
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_562_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9546..11513)
DNA (1968bp) protein (656aa)
acetyl-CoA synthetase (EC:6.2.1.1); K01895 acetyl-CoA synthetase [EC:6.2.1.1] Tax=GWE1_Thiobacillus_62_9_curated
acetyl-CoA synthetase (EC:6.2.1.1)
acetyl-CoA synthetase n=1 Tax=Thiobacillus thioparus RepID=UPI00036E417E rbh
SCNpilot_expt_300_bf_scaffold_562_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11567..14260
DNA (2694bp) protein (898aa)
putative glutamate-ammonia-ligase adenylyltransferase (EC:2.7.7.42); K00982 glutamate-ammonia-ligase adenylyltransferase [EC:2.7.7.42] Tax=GWE1_Thiobacillus_62_9_curated
glutamate-ammonia-ligase adenylyltransferase (EC:2.7.7.42)
glutamine-synthetase adenylyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI000380E767 rbh
SCNpilot_expt_300_bf_scaffold_562_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14306..14779
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036EB5F5
MarR family transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
MarR family transcriptional regulator
SCNpilot_expt_300_bf_scaffold_562_14
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14788..17364)
DNA (2577bp) protein (859aa)
cation-transporting ATPase, E1-E2 type (EC:3.6.3.8); K01537 Ca2+-transporting ATPase [EC:3.6.3.8] Tax=CG_Hydro_01
cation-transporting ATPase, E1-E2 type (EC:3.6.3.8)
ATPase n=1 Tax=Thiobacillus thioparus RepID=UPI000376E0A2
SCNpilot_expt_300_bf_scaffold_562_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17354..18370)
DNA (1017bp) protein (339aa)
Ca2+:cation antiporter, CaCA family id=1329028 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
Ca2+/H+ antiporter; K07301 inner membrane protein Tax=GWE1_Thiobacillus_62_9_curated
Ca2+/H+ antiporter
SCNpilot_expt_300_bf_scaffold_562_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18720..19616
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037357B9 rbh
UspA domain-containing protein Tax=GWE1_Thiobacillus_62_9_curated
uspA; universal stress protein
SCNpilot_expt_300_bf_scaffold_562_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19644..20558)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037B94D7 rbh
mechanosensitive ion channel; K03442 small conductance mechanosensitive channel Tax=GWE1_Thiobacillus_62_9_curated
mechanosensitive ion channel MscS
SCNpilot_expt_300_bf_scaffold_562_18
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20564..22951)
DNA (2388bp) protein (796aa)
sucrose synthase (EC:2.4.1.13); K00695 sucrose synthase [EC:2.4.1.13] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
sucrose synthase (EC:2.4.1.13)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003729A6F rbh
SCNpilot_expt_300_bf_scaffold_562_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22948..25110)
DNA (2163bp) protein (721aa)
sucrose-phosphate phosphatase (EC:2.4.1.14); K00696 sucrose-phosphate synthase [EC:2.4.1.14] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
sucrose-phosphate phosphatase (EC:2.4.1.14)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003798335 rbh
SCNpilot_expt_300_bf_scaffold_562_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25103..26068)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003688683 rbh
PfkB domain-containing protein Tax=GWE1_Thiobacillus_62_9_curated
PfkB domain-containing protein
SCNpilot_expt_300_bf_scaffold_562_21
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26141..27151)
DNA (1011bp) protein (337aa)
hypothetical protein id=12497794 bin=THIO_MID species=Limnobacter sp. MED105 genus=Limnobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:EDM84284.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED
hypothetical protein
SCNpilot_expt_300_bf_scaffold_562_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27475..28707
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000375C0A2 rbh
sodium/hydrogen exchanger Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
sodium/hydrogen exchanger
SCNpilot_expt_300_bf_scaffold_562_23
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28772..29230
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B2Y0_9PROT
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_562_24
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29232..30566
DNA (1335bp) protein (445aa)
Transporter family protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABV0_9PROT rbh
transporter family protein
Transporter family protein {ECO:0000313|EMBL:BAN35028.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella d
SCNpilot_expt_300_bf_scaffold_562_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30606..31937
DNA (1332bp) protein (444aa)
serine protease n=1 Tax=Thiobacillus thioparus RepID=UPI00036C1BB0 rbh
transmembrane protein; K07403 membrane-bound serine protease (ClpP class) Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
transmembrane protein
SCNpilot_expt_300_bf_scaffold_562_26
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31940..32698
DNA (759bp) protein (253aa)
membrane protein n=1 Tax=Thiobacillus thioparus RepID=UPI000368D2DD rbh
SPFH domain-containing protein/band 7 family protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SPFH domain-containing protein/band 7 family protein
SCNpilot_expt_300_bf_scaffold_562_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32854..33522
DNA (669bp) protein (223aa)
HflBKC-binding inner membrane protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035DA351 rbh
hypothetical protein; K06890 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_562_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33558..34292
DNA (735bp) protein (245aa)
putative TatD related DNase; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=GWE1_Thiobacillus_62_9_curated
DNAase n=1 Tax=Thiobacillus thioparus RepID=UPI00037523B5
TatD related DNase
SCNpilot_expt_300_bf_scaffold_562_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34289..34927)
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036809F6
diguanylate cyclase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
diguanylate cyclase
SCNpilot_expt_300_bf_scaffold_562_30
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34888..35331)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036809F6
diguanylate cyclase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
diguanylate cyclase
Displaying items 1-30 of 52 in total

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