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SCNpilot_expt_300_bf_scaffold_623

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_623_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..856)
DNA (855bp) protein (285aa)
hypothetical protein, partial n=1 Tax=Thiobacillus thioparus RepID=UPI0003736D19 rbh
methyl-accepting chemotaxis sensory transducer Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
methyl-accepting chemotaxis sensory transducer
SCNpilot_expt_300_bf_scaffold_623_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(905..1408)
DNA (504bp) protein (168aa)
purine-binding chemotaxis protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035D5A8E rbh
CheW protein; K03408 purine-binding chemotaxis protein CheW Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
chemotaxis protein CheW
SCNpilot_expt_300_bf_scaffold_623_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1433..3511)
DNA (2079bp) protein (693aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilacea
chemotaxis protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037B6818 rbh
signal transduction histidine kinase CheA-like protein rbh
SCNpilot_expt_300_bf_scaffold_623_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3557..3919)
DNA (363bp) protein (121aa)
Fis family transcriptional regulator n=1 Tax=Thiobacillus thioparus RepID=UPI0003610FC0
response regulator receiver domain-containing protein; K03413 two-component system, chemotaxis family, response regulator CheY Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
response regulator receiver domain-containing protein
SCNpilot_expt_300_bf_scaffold_623_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3974..4534)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036D24FD rbh
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_623_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4543..5442)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036CDAC2 rbh
flgL; flagellar hook-associated protein FlgL
Flagellin, flagellar hook-associated protein 3 FlgL {ECO:0000313|EMBL:AAZ97580.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacill
SCNpilot_expt_300_bf_scaffold_623_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5448..7355)
DNA (1908bp) protein (636aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003806CDC rbh
flgK; flagellar hook-associated protein FlgK
Flagellar hook-associated protein {ECO:0000313|EMBL:AAZ97581.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacil
SCNpilot_expt_300_bf_scaffold_623_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7436..8386)
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003798E2F rbh
mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; K02395 flagellar protein FlgJ Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
SCNpilot_expt_300_bf_scaffold_623_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8387..8803)
DNA (417bp) protein (139aa)
flgI; flagellar basal body P-ring protein; K02394 flagellar P-ring protein precursor FlgI Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
flgI; flagellar basal body P-ring protein; K02394 flagellar P-ring protein precursor FlgI id=12493519 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
flgI; flagellar basal body P-ring biosynthesis protein FlgA
SCNpilot_expt_300_bf_scaffold_623_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8809..9381)
DNA (573bp) protein (191aa)
flagellar P-ring protein FlgI n=1 Tax=Thiobacillus thioparus RepID=UPI00037F9873
flgI; flagellar basal body P-ring protein; K02394 flagellar P-ring protein precursor FlgI Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
flgI; flagellar basal body P-ring biosynthesis protein FlgA
SCNpilot_expt_300_bf_scaffold_623_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9394..10062)
DNA (669bp) protein (223aa)
flagellar L-ring protein FlgH n=1 Tax=Thiobacillus thioparus RepID=UPI00038187EA rbh
flagellar L-ring protein FlgH; K02393 flagellar L-ring protein precursor FlgH Tax=GWE1_Thiobacillus_62_9_curated
flagellar L-ring protein FlgH
SCNpilot_expt_300_bf_scaffold_623_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10071..10166)
DNA (96bp) protein (32aa)
flagellar basal body rod protein FlgG n=1 Tax=Thiobacillus thioparus RepID=UPI000377B500
flagellar basal body rod protein FlgG; K02392 flagellar basal-body rod protein FlgG Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
flgG; FlgG flagellar basal body rod protein
SCNpilot_expt_300_bf_scaffold_623_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10154..10795)
DNA (642bp) protein (214aa)
flagellar basal body rod protein FlgG n=1 Tax=Thiobacillus thioparus RepID=UPI000377B500
flagellar basal body rod protein FlgG; K02392 flagellar basal-body rod protein FlgG Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
flagellar basal body rod protein FlgG
SCNpilot_expt_300_bf_scaffold_623_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10821..11561)
DNA (741bp) protein (247aa)
flagellar basal body rod protein FlgF n=1 Tax=Thiobacillus thioparus RepID=UPI00035C1362 rbh
flgF; flagellar basal body rod protein FlgF; K02391 flagellar basal-body rod protein FlgF Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
flgF; flagellar basal body rod protein FlgF
SCNpilot_expt_300_bf_scaffold_623_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11587..11676)
DNA (90bp) protein (30aa)
flgE; flagellar hook protein FlgE; K02390 flagellar hook protein FlgE Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_300_bf_scaffold_623_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11673..12758)
DNA (1086bp) protein (362aa)
flagellar hook protein FlgE n=1 Tax=Thiobacillus thioparus RepID=UPI0003768699 rbh
flgE; flagellar hook protein FlgE; K02390 flagellar hook protein FlgE Tax=GWE1_Thiobacillus_62_9_curated
flgE; flagellar hook protein FlgE
SCNpilot_expt_300_bf_scaffold_623_17
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12815..13480)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036BBA3E rbh
flgD; flagellar basal body rod modification protein
Flagellar basal-body rod modification protein FlgD {ECO:0000313|EMBL:AAZ97588.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillu
SCNpilot_expt_300_bf_scaffold_623_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13506..13910)
DNA (405bp) protein (135aa)
flagellar basal body rod protein FlgC n=1 Tax=Thiobacillus thioparus RepID=UPI000380CFBC
flagellar basal-body rod protein FlgC; K02388 flagellar basal-body rod protein FlgC Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
flagellar basal body rod protein FlgC
SCNpilot_expt_300_bf_scaffold_623_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13923..14330)
DNA (408bp) protein (136aa)
flagellar biosynthesis protein FlgB n=1 Tax=Thiobacillus thioparus RepID=UPI00035DCDC6
flagellar basal-body rod protein FlgB; K02387 flagellar basal-body rod protein FlgB Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
flagellar basal-body rod protein FlgB
SCNpilot_expt_300_bf_scaffold_623_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14502..15218
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000368DD23 rbh
flgA; flagellar basal body P-ring biosynthesis protein FlgA; K02386 flagella basal body P-ring formation protein FlgA Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
flgA; flagellar basal body P-ring biosynthesis protein FlgA
SCNpilot_expt_300_bf_scaffold_623_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15317..15613
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000361F3AE
putative anti-sigma-28 factor, FlgM; K02398 negative regulator of flagellin synthesis FlgM Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
anti-sigma-28 factor, FlgM
SCNpilot_expt_300_bf_scaffold_623_22
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15600..16088
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036260D3
flagella synthesis protein FlgN
Putative flagella synthesis protein FlgN {ECO:0000313|EMBL:AAZ97593.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sourc
SCNpilot_expt_300_bf_scaffold_623_23
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16105..17934)
DNA (1830bp) protein (610aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003764590 rbh
mnmC; 5-methylaminomethyl-2-thiouridine methyltransferase
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000255|HAMAP-Rule:MF_01102}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000255|HAMAP-Rule:MF_011
SCNpilot_expt_300_bf_scaffold_623_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17979..19133
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000360E6B1 rbh
secretion protein HlyD; K02005 HlyD family secretion protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
secretion protein HlyD
SCNpilot_expt_300_bf_scaffold_623_25
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19130..19801
DNA (672bp) protein (224aa)
ABC transporter n=1 Tax=Thiobacillus thioparus RepID=UPI00035E0465 rbh
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ABC transporter-like protein
SCNpilot_expt_300_bf_scaffold_623_26
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20043..21245
DNA (1203bp) protein (401aa)
peptide ABC transporter permease n=1 Tax=Thiobacillus thioparus RepID=UPI00036B9511 rbh
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_623_27
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21242..22441
DNA (1200bp) protein (400aa)
peptide ABC transporter permease n=1 Tax=Thiobacillus thioparus RepID=UPI0003623CEB rbh
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_623_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22673..23095
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003688540
putative periplasmic protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
periplasmic protein
SCNpilot_expt_300_bf_scaffold_623_29
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23148..23693)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035FA708 rbh
flavin reductase-like protein
Flavin reductase-like protein {ECO:0000313|EMBL:AAZ97596.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobaci
SCNpilot_expt_300_bf_scaffold_623_30
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23900..24220)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381CA9C
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
Displaying items 1-30 of 34 in total

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