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SCNpilot_expt_300_bf_scaffold_746

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_746_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..787
DNA (786bp) protein (262aa)
DNA topoisomerase III (EC:5.99.1.2) Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
DNA topoisomerase III (EC:5.99.1.2)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000361044C
SCNpilot_expt_300_bf_scaffold_746_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

800..1000
DNA (201bp) protein (67aa)
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_300_bf_scaffold_746_3
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

997..1695
DNA (699bp) protein (233aa)
signal peptide peptidase SppA, 36K type; K04773 protease IV [EC:3.4.21.-] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
peptidase S49 n=1 Tax=Thiobacillus denitrificans RepID=UPI00036B511E
sppA; periplasmic serine protease (ClpP class)
SCNpilot_expt_300_bf_scaffold_746_4
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2003..2296
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000361B72E
hypothetical protein id=12498594 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
SCNpilot_expt_300_bf_scaffold_746_5
R_Methylophilales_57_10, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2346..2696
DNA (351bp) protein (117aa)
transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI000378B0FF
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Methylophilales_57_10_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_746_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3057..5315
DNA (2259bp) protein (753aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3X7_VARPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU38096.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (
SCNpilot_expt_300_bf_scaffold_746_7
unknown

Not on your lists

comp(5574..5828)
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_746_8
unknown

Not on your lists

comp(5909..6400)
DNA (492bp) protein (164aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_746_9
unknown

Not on your lists

comp(6418..6852)
DNA (435bp) protein (145aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_746_10
unknown

Not on your lists

comp(6954..7514)
DNA (561bp) protein (187aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_746_11
unknown

Not on your lists

comp(7623..8135)
DNA (513bp) protein (171aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_746_12
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8177..10507)
DNA (2331bp) protein (777aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037EA709 rbh
cell division protein FtsZ
Cell division protein FtsZ {ECO:0000313|EMBL:AGG33846.1}; TaxID=543913 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="beta proteobacterium CB.;"
SCNpilot_expt_300_bf_scaffold_746_13
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10497..10919)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000370BA66
putative transcriptional regulator, MerR family Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
putative transcriptional regulator, MerR family
SCNpilot_expt_300_bf_scaffold_746_14
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11096..11710)
DNA (615bp) protein (205aa)
phage integrase family protein id=12498113 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Tyrosine recombinase XerD {ECO:0000313|EMBL:KFB71090.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;
phage integrase family protein
SCNpilot_expt_300_bf_scaffold_746_15
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12009..13133
DNA (1125bp) protein (375aa)
extracellular repeat-containing protein, HAF family Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Extracellular repeat protein, HAF family id=4133802 bin=GWF2_Planctomycete_41_51 species=Gloeocapsa sp. PCC 7428 genus=Gloeocapsa taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
extracellular repeat-containing protein, HAF family
SCNpilot_expt_300_bf_scaffold_746_16
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13541..13849
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI00036FE90B
uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:BAP89826.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
SCNpilot_expt_300_bf_scaffold_746_17
unknown

Not on your lists

comp(14336..14461)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_746_18
unknown

Not on your lists

comp(14501..14746)
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_746_19
unknown

Not on your lists

15194..15370
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_746_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16034..16606
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036B59DD rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_746_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16621..16899
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000360636D
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_300_bf_scaffold_746_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17058..17327
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003755849
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 22 items

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