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SCNpilot_expt_300_bf_scaffold_940

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_940_1
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50..370)
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BIA9_CHLPD
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_60_92
SCNpilot_expt_300_bf_scaffold_940_2
unknown

Not on your lists

comp(370..510)
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_940_3
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(673..1047)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D9W9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU81509.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG
hypothetical protein
SCNpilot_expt_300_bf_scaffold_940_4
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1155..1760)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003815536
hypothetical protein Tax=GWC2_Geobacteraceae_58_44_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_940_5
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1776..2513)
DNA (738bp) protein (246aa)
hypothetical protein Tax=GWC2_Geobacteraceae_53_11_curated
Uncharacterized protein id=1717444 bin=GWB2_Geobacter-like_52_12 species=Pseudomonas aeruginosa genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good rbh
hypothetical protein
SCNpilot_expt_300_bf_scaffold_940_6
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2506..3744)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RW57_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV37867.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosph
SCNpilot_expt_300_bf_scaffold_940_7
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3741..4043)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RW58_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV37868.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosph
SCNpilot_expt_300_bf_scaffold_940_8
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4036..4701)
DNA (666bp) protein (222aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RW59_ACCPU
heavy metal efflux pump, CzcA family
Cation efflux system protein CzcA {ECO:0000313|EMBL:KFB74620.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp.
SCNpilot_expt_300_bf_scaffold_940_9
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4694..7063)
DNA (2370bp) protein (790aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RW59_ACCPU
Cation efflux system protein CzcA {ECO:0000313|EMBL:KFB74620.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp.
heavy metal efflux pump, CzcA family
SCNpilot_expt_300_bf_scaffold_940_10
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7063..8139)
DNA (1077bp) protein (359aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RW60_ACCPU rbh
efflux transporter RND family, MFP subunit
Nickel and cobalt resistance protein CnrB {ECO:0000313|EMBL:KFB74621.1}; Flags: Precursor;; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Ca
SCNpilot_expt_300_bf_scaffold_940_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8422..8796)
DNA (375bp) protein (125aa)
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Putative uncharacterized protein id=1362751 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
SCNpilot_expt_300_bf_scaffold_940_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9278..10138
DNA (861bp) protein (287aa)
Putative uncharacterized protein id=1361659 bin=GWE1_T_denit_62_9 species=Xanthomonas fuscans genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
transcriptional regulator Tax=GWE1_Thiobacillus_62_9_curated
transcriptional regulator
SCNpilot_expt_300_bf_scaffold_940_13
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10120..11595
DNA (1476bp) protein (492aa)
hypothetical protein Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
Putative uncharacterized protein (Fragment) id=1361660 bin=GWE1_T_denit_62_9 species=Ricinus communis genus=Ricinus taxon_order=Malpighiales taxon_class=unknown phylum=Streptophyta tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
SCNpilot_expt_300_bf_scaffold_940_14
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11592..12272
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VWW9_9GAMM
hypothetical protein Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_940_15
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12269..15718
DNA (3450bp) protein (1150aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WWA8_PSEUU
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Chromosome segregation protein SMC-like
SCNpilot_expt_300_bf_scaffold_940_16
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15726..16697
DNA (972bp) protein (324aa)
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=I6RM05_PSEAI
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_940_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16991..17218)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A6DD7
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_300_bf_scaffold_940_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17628..17951
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035DA056
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component,-related enzymes
SCNpilot_expt_300_bf_scaffold_940_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17948..19246
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035DA056
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_940_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19379..20608
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003715C3B
conjugative coupling factor TraD, TOL family Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
conjugal transfer pilus assembly protein TraD
SCNpilot_expt_300_bf_scaffold_940_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20631..21383
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003715C3B
conjugative coupling factor TraD, TOL family Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Type IV secretory pathway, VirD4 components
SCNpilot_expt_300_bf_scaffold_940_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22145..22522
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D3D14
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_940_23
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22503..22838
DNA (336bp) protein (112aa)
XRE family transcriptional regulator n=1 Tax=Lamprocystis purpurea RepID=UPI0003708479
helix-turn-helix family protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
helix-turn-helix family protein
SCNpilot_expt_300_bf_scaffold_940_24
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23177..24049
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003617A50 rbh
soj; chromosome partitioning-like protein; K12055 chromosome partitioning related protein ParA Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
Chromosome (plasmid) partitioning protein ParA
SCNpilot_expt_300_bf_scaffold_940_25
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24046..25722
DNA (1677bp) protein (559aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000373AF55
Protein with ParB-like nuclease domain in PFGI-1-like cluster
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG22353.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholder
SCNpilot_expt_300_bf_scaffold_940_26
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25719..26306
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036213A3
SCNpilot_expt_300_bf_scaffold_940_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26293..26727
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000369FF29
replication protein
O domain protein {ECO:0000313|EMBL:KEJ58490.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-0
SCNpilot_expt_300_bf_scaffold_940_28
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26706..28157
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035EB131
Periplasmic protein TonB, links inner and outer membranes
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG22349.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholder
SCNpilot_expt_300_bf_scaffold_940_29
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30274..30699
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000382974B
SCNpilot_expt_300_bf_scaffold_940_30
Lactobacillus phage phiLdb, Caudovirales, Viruses

Not on your lists

30696..31457
DNA (762bp) protein (254aa)
BRO-like protein n=1 Tax=Pediococcus pentosaceus SL4 RepID=U5ZKG2_PEDPE
BRO-like protein
Prophage antirepressor {ECO:0000313|EMBL:AGW43718.1}; TaxID=1399942 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Lactobacillus phage phiLdb.;"
Displaying items 1-30 of 33 in total

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