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SCNpilot_expt_300_bf_scaffold_1006_7

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_62_448

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 3021..3581

Top 3 Functional Annotations

Value Algorithm Source
transcription elongation factor GreB n=1 Tax=Thiobacillus thioparus RepID=UPI0003761A99 similarity UNIREF
DB: UNIREF100
  • Identity: 95.7
  • Coverage: 186.0
  • Bit_score: 361
  • Evalue 5.30e-97
  • rbh
greB; transcription elongation factor GreB; K04760 transcription elongation factor GreB Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 186.0
  • Bit_score: 361
  • Evalue 7.40e-97
greB; transcription elongation factor GreB similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 187.0
  • Bit_score: 328
  • Evalue 1.40e-87

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGAACAAGGCATTCGTCAAGGAAACCGACGCACCGGATGCGGACGAGGACGAGATCGATGCGCCCGCGCTCCCCGCCGGGTCGAAGAACTACATGACGCCCGCGGGCTACGCGCAGCTCGATGCCGAATTCAACCAGCTGTGGAAAGTCGAACGCCCCAAACTGGTGGAAACCATCTCGTGGGCGGCCAGCAACGGCGATCGCTCCGAAAACGGCGACTACATCTACGGCAAGAAGCGTCTGCGCGAAGTCGATCGACGCATCCGCTTTTTGTCCAAGCGCCTGGAGCACGCCGATGTCGTCGACCCAGCCACCCGCGAGGACACCGACCAGGTGTTCTTCGGCGCCACCGTCACGATCGCGGATGAAGACGGCAGCGAATCCACCTTCGCCATCGTCGGCATCGACGAAGCCGATGCCGGGCGGGGCCGCATCGCCTGGATCTCACCGATGGCGCGCGCACTCCTGAAAGCGCGCGAAGGCGACACCGTCAGCGTCCAGACGCCCGAAGGACGGCGCGAAGTCGACATCGTCGCGGTACGCTACCAGGCTATCGATTGA
PROTEIN sequence
Length: 187
MNKAFVKETDAPDADEDEIDAPALPAGSKNYMTPAGYAQLDAEFNQLWKVERPKLVETISWAASNGDRSENGDYIYGKKRLREVDRRIRFLSKRLEHADVVDPATREDTDQVFFGATVTIADEDGSESTFAIVGIDEADAGRGRIAWISPMARALLKAREGDTVSVQTPEGRREVDIVAVRYQAID*