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SCNpilot_expt_300_bf_scaffold_1006

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1006_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47..664
DNA (618bp) protein (206aa)
aromatic acid decarboxylase; K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX [EC:4.1.1.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
aromatic acid decarboxylase; K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX [EC:4.1.1.-] id=12495129 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
aromatic acid decarboxylase
SCNpilot_expt_300_bf_scaffold_1006_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

661..1257
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000363AC15 rbh
peptidase S16; K07157 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
peptidase S16
SCNpilot_expt_300_bf_scaffold_1006_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1257..1808
DNA (552bp) protein (184aa)
pyridoxamine 5''''-phosphate oxidase n=1 Tax=Thiobacillus thioparus RepID=UPI000368CFBD rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1006_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1805..2008
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035C923E
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_300_bf_scaffold_1006_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2041..2769)
DNA (729bp) protein (243aa)
heme biosynthesis protein HemY n=1 Tax=Thiobacillus thioparus RepID=UPI0003752DAF rbh
HesA/MoeB/ThiF family protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
HesA/MoeB/ThiF family protein
SCNpilot_expt_300_bf_scaffold_1006_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2786..2986
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036A4676
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1006_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3021..3581
DNA (561bp) protein (187aa)
transcription elongation factor GreB n=1 Tax=Thiobacillus thioparus RepID=UPI0003761A99 rbh
greB; transcription elongation factor GreB; K04760 transcription elongation factor GreB Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
greB; transcription elongation factor GreB
SCNpilot_expt_300_bf_scaffold_1006_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3664..4056
DNA (393bp) protein (131aa)
id=12495122 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
cytochrome c class I Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_300_bf_scaffold_1006_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4097..4939)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037B8093 rbh
thioredoxin; K05838 putative thioredoxin Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
thioredoxin
SCNpilot_expt_300_bf_scaffold_1006_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4979..6349)
DNA (1371bp) protein (457aa)
adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
adenylosuccinate lyase (EC:4.3.2.2)
adenylosuccinate lyase n=1 Tax=Thiobacillus thioparus RepID=UPI000377A2F9 rbh
SCNpilot_expt_300_bf_scaffold_1006_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6434..7051
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037686DF rbh
DedA family protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
membrane protein
SCNpilot_expt_300_bf_scaffold_1006_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7048..7728
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037AB5B5 rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1006_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7761..8354)
DNA (594bp) protein (198aa)
recombinase RecR n=1 Tax=Thiobacillus thioparus RepID=UPI00036195E5 rbh
recR; recombination protein RecR; K06187 recombination protein RecR Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
recR; recombination protein RecR
SCNpilot_expt_300_bf_scaffold_1006_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8373..8699)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036D7504
hypothetical protein; K09747 hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_1006_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8696..10420)
DNA (1725bp) protein (575aa)
DNA polymerase subunits gamma and tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
DNA polymerase subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III subunit gamma/tau n=1 Tax=Thiobacillus thioparus RepID=UPI000373D07E rbh
SCNpilot_expt_300_bf_scaffold_1006_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10643..11719)
DNA (1077bp) protein (359aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=GWE1_Thiobacillus_62_9_curated
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Thiobacillus thioparus RepID=UPI0003721768 rbh
SCNpilot_expt_300_bf_scaffold_1006_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12017..14149
DNA (2133bp) protein (711aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003825ACC
signal transduction protein Tax=GWE1_Thiobacillus_62_9_curated
diguanylate cyclase/phosphodiesterase
SCNpilot_expt_300_bf_scaffold_1006_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14280..15197
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003825ACC
signal transduction protein Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_300_bf_scaffold_1006_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16597..16887)
DNA (291bp) protein (97aa)
putative modulator of DNA gyrase; K03568 TldD protein id=12493791 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
peptidase U62 modulator of DNA gyrase; K03568 TldD protein Tax=GWE1_Thiobacillus_62_9_curated
tldD; putative peptidase
Displaying 19 items

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