ggKbase home page

SCNpilot_expt_300_bf_scaffold_1187

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_1187_1
unknown

Not on your lists

1..213
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_1187_2
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

289..1827
DNA (1539bp) protein (513aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
glycerol-3-phosphate dehydrogenase (EC:1.1.5.3)
glycerol-3-phosphate dehydrogenase n=1 Tax=Xanthomonas sacchari RepID=UPI000262AB4E rbh
SCNpilot_expt_300_bf_scaffold_1187_3
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1824..3329
DNA (1506bp) protein (502aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:
glpK; glycerol kinase (EC:2.7.1.30)
glycerol kinase n=1 Tax=Dyella japonica RepID=UPI0002D97FC1
SCNpilot_expt_300_bf_scaffold_1187_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3337..4272)
DNA (936bp) protein (312aa)
Sugar kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFU5_9GAMM rbh
Sugar kinase {ECO:0000313|EMBL:EIL98336.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans
sugar kinase, ribokinase
SCNpilot_expt_300_bf_scaffold_1187_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4545..4913
DNA (369bp) protein (123aa)
Rod shape-determining protein MreB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQR5_9GAMM
rod shape-determining protein MreB Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
rod shape-determining protein MreB
SCNpilot_expt_300_bf_scaffold_1187_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4883..5536
DNA (654bp) protein (218aa)
Rod shape-determining protein MreB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQR5_9GAMM
Rod shape-determining protein MreB {ECO:0000313|EMBL:EIL89556.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhod
rod shape-determining protein MreB
SCNpilot_expt_300_bf_scaffold_1187_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5558..6523
DNA (966bp) protein (322aa)
Cell shape-determining protein MreC n=1 Tax=Rhodanobacter denitrificans RepID=I4WF10_9GAMM rbh
rod shape-determining protein MreC
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammapr
SCNpilot_expt_300_bf_scaffold_1187_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6520..7005
DNA (486bp) protein (162aa)
Rod shape-determining protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQR3_9GAMM
Rod shape-determining protein {ECO:0000313|EMBL:EIL89554.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
rod shape-determining protein MreD
SCNpilot_expt_300_bf_scaffold_1187_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7022..8983
DNA (1962bp) protein (654aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:AGG87569.1}; EC=2.4.1.129 {ECO:0000313|EMBL:AGG87569.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xa
Peptidoglycan glycosyltransferase n=5 Tax=Rhodanobacter denitrificans RepID=M4NAN9_9GAMM rbh
SCNpilot_expt_300_bf_scaffold_1187_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8980..10095
DNA (1116bp) protein (372aa)
Rod shape-determining protein RodA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQR1_9GAMM rbh
cell elongation-specific peptidoglycan biosynthesis regulator RodA Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
cell elongation-specific peptidoglycan biosynthesis regulator RodA
SCNpilot_expt_300_bf_scaffold_1187_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10192..11196
DNA (1005bp) protein (335aa)
Lytic murein transglycosylase B n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQR0_9GAMM
Lytic murein transglycosylase B {ECO:0000313|EMBL:EIL89551.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodano
lytic murein transglycosylase B
SCNpilot_expt_300_bf_scaffold_1187_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11193..12101
DNA (909bp) protein (303aa)
Rare lipoprotein A n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQQ9_9GAMM rbh
Rare lipoprotein A {ECO:0000313|EMBL:EIL89550.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathi
rare lipoprotein A
SCNpilot_expt_300_bf_scaffold_1187_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12243..13361
DNA (1119bp) protein (373aa)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VQG1_9GAMM
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:EIL89452.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rho
penicillin-binding protein 6
SCNpilot_expt_300_bf_scaffold_1187_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13361..13651
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NAP3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87574.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter de
SCNpilot_expt_300_bf_scaffold_1187_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13707..14456
DNA (750bp) protein (250aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000
Octanoyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NAL4_9GAMM rbh
lipoate-protein ligase B
SCNpilot_expt_300_bf_scaffold_1187_16
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14311..14955)
DNA (645bp) protein (215aa)
hypothetical protein Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCNpilot_expt_300_bf_scaffold_1187_17
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14985..15416
DNA (432bp) protein (144aa)
Lipoyl synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFT4_9GAMM
lipoate synthase Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
lipoate synthase
SCNpilot_expt_300_bf_scaffold_1187_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15504..16301
DNA (798bp) protein (266aa)
C-terminal processing peptidase n=3 Tax=Rhodanobacter denitrificans RepID=M4NCQ8_9GAMM
C-terminal processing peptidase
C-terminal processing peptidase {ECO:0000313|EMBL:AGG87577.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.
SCNpilot_expt_300_bf_scaffold_1187_19
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16259..17536
DNA (1278bp) protein (426aa)
C-terminal processing peptidase n=3 Tax=Rhodanobacter denitrificans RepID=M4NCQ8_9GAMM
C-terminal processing peptidase Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
C-terminal processing peptidase
SCNpilot_expt_300_bf_scaffold_1187_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17630..19522)
DNA (1893bp) protein (631aa)
Sulfotransferase family protein n=4 Tax=Rhodanobacter denitrificans RepID=M4NDP4_9GAMM rbh
sulfotransferase family protein
Sulfotransferase family protein {ECO:0000313|EMBL:AGG87578.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob
SCNpilot_expt_300_bf_scaffold_1187_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19625..22501)
DNA (2877bp) protein (959aa)
Outer membrane receptor for ferrienterochelin and colicins n=8 Tax=Rhodanobacter denitrificans RepID=M4NAP4_9GAMM rbh
outer membrane receptor for ferrienterochelin and colicins
Outer membrane receptor for ferrienterochelin and colicins {ECO:0000313|EMBL:AGG87579.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanth
SCNpilot_expt_300_bf_scaffold_1187_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22707..23273)
DNA (567bp) protein (189aa)
Leucine aminopeptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVM1_9GAMM
Leucine aminopeptidase {ECO:0000313|EMBL:EIL91262.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp
leucyl aminopeptidase
Displaying 22 items

View Taxonomy