name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_300_bf_scaffold_374_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22..426)
|
BadM/Rrf2 family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3K4_9GAMM
BadM/Rrf2 family transcriptional regulator {ECO:0000313|EMBL:EIL94045.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sour
transcriptional regulator
|
|
SCNpilot_expt_300_bf_scaffold_374_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
526..1203
|
type 12 methyltransferase; K15256 tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Type 12 methyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZA3_9GAMM
rbh
type 12 methyltransferase
|
|
SCNpilot_expt_300_bf_scaffold_374_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1348..2103)
|
short chain dehydrogenase (EC:1.1.1.-) Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
short chain dehydrogenase (EC:1.1.1.-)
Short chain dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VML4_9GAMM
rbh
|
|
SCNpilot_expt_300_bf_scaffold_374_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2302..3036)
|
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3K6_9GAMM
rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EIL94047.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source=
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
|
|
SCNpilot_expt_300_bf_scaffold_374_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3126..3725)
|
2-dehydropantoate 2-reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3K7_9GAMM
rbh
2-dehydropantoate 2-reductase {ECO:0000313|EMBL:EIL94048.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
2-dehydropantoate 2-reductase
|
|
SCNpilot_expt_300_bf_scaffold_374_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3854..4759
|
LysR family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3K8_9GAMM
rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EIL94049.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
transcriptional regulator
|
|
SCNpilot_expt_300_bf_scaffold_374_7
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5233..6138)
|
DNA-binding domain-containing protein, AraC-type n=1 Tax=Acidovorax sp. CF316 RepID=J1EGG8_9BURK
rbh
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EJE51354.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sour
AraC family transcriptional regulator
|
|
SCNpilot_expt_300_bf_scaffold_374_8
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6274..7062
|
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KJH7_9BURK
rbh
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_374_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7290..7796
|
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBE6_9GAMM
rbh
methylated-DNA--protein-cysteine methyltransferase
|
|
SCNpilot_expt_300_bf_scaffold_374_10
unknown
|
Not on your lists |
comp(7955..8545)
|
This feature has no annotations |
|
SCNpilot_expt_300_bf_scaffold_374_11
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8780..9211)
|
Uncharacterized protein {ECO:0000313|EMBL:KGI77439.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
|
|
SCNpilot_expt_300_bf_scaffold_374_12
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9568..10119
|
LemA family protein n=1 Tax=Thiocapsa marina 5811 RepID=F9U802_9GAMM
lema family protein; K03744 LemA protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
LemA family protein
|
|
SCNpilot_expt_300_bf_scaffold_374_13
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10116..11864
|
Putative transmembrane signal peptide protein n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LSW3_DESBD
transmembrane signal peptide protein
Tax=BJP_08E140C01_Desulfomicrobium_58_14
|
|
SCNpilot_expt_300_bf_scaffold_374_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12133..12702
|
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFE0_9GAMM
rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL98181.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
Peroxiredoxin
|
|
SCNpilot_expt_300_bf_scaffold_374_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12743..13972)
|
Major facilitator superfamily protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBE5_9GAMM
rbh
Major facilitator superfamily protein {ECO:0000313|EMBL:EIL96786.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
major facilitator superfamily transporter
|
|
SCNpilot_expt_300_bf_scaffold_374_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14288..15958)
|
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NHP9_9GAMM
rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89617.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
|
|
SCNpilot_expt_300_bf_scaffold_374_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16412..17215
|
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NPP6_9GAMM
rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89616.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
|
|
SCNpilot_expt_300_bf_scaffold_374_18
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17328..17969
|
Uncharacterized protein {ECO:0000313|EMBL:EZP37279.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacter
hypothetical protein id=5079109 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_374_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17986..18741)
|
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBE7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96788.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
mtfA; Protein MtfA
|
|
SCNpilot_expt_300_bf_scaffold_374_20
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18836..22180)
|
Cyclic di-GMP phosphodiesterase Gmr {ECO:0000313|EMBL:KFB78270.1}; EC=3.1.4.52 {ECO:0000313|EMBL:KFB78270.1};; Flags: Precursor;; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; C
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00037444C2
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
|
|
SCNpilot_expt_300_bf_scaffold_374_21
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria
|
Not on your lists |
22596..23090
|
cupin n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000362924F
anti-ECFsigma factor, ChrR Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
cupin
|
|
SCNpilot_expt_300_bf_scaffold_374_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23110..23658)
|
Lipoprotein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVP6_9GAMM
Lipoprotein {ECO:0000313|EMBL:EIL91287.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli
|
|
SCNpilot_expt_300_bf_scaffold_374_23
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23677..24744)
|
Putative uncharacterized protein n=2 Tax=Xanthomonas campestris RepID=Q4UVZ7_XANC8
rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM51829.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concret
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_374_24
unknown
|
Not on your lists |
25217..25549
|
This feature has no annotations |
|
SCNpilot_expt_300_bf_scaffold_374_25
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25619..26677
|
Uncharacterized protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5DZI4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESS72706.1}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobul
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_374_26
unknown
|
Not on your lists |
26716..28128
|
This feature has no annotations |
|
SCNpilot_expt_300_bf_scaffold_374_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28185..28850
|
Glutathione S-transferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NPM8_9GAMM
rbh
glutathione S-transferase
Glutathione S-transferase {ECO:0000313|EMBL:AGG89601.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sou
|
|
SCNpilot_expt_300_bf_scaffold_374_28
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(28893..29642)
|
ubiG; 3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64)
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:CCH87731.1}; EC=2.1.1.64 {ECO:0000313|EMBL:CCH87731.1};; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophi
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EWG8_MODMB
|
|
SCNpilot_expt_300_bf_scaffold_374_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29683..30366)
|
Short chain dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Z9_9GAMM
rbh
Short chain dehydrogenase {ECO:0000313|EMBL:EIL95240.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
protein DitG
|
|
SCNpilot_expt_300_bf_scaffold_374_30
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(30439..31665)
|
Peptidase M24 n=1 Tax=mine drainage metagenome RepID=E6QK81_9ZZZZ
Xaa-Pro aminopeptidase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
peptidase M24
|