name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_300_bf_scaffold_606_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(35..838)
|
ornithine carbamoyltransferase (EC:2.1.3.9)
Ornithine carbamoyltransferase {ECO:0000313|EMBL:AGG88357.1}; EC=2.1.3.9 {ECO:0000313|EMBL:AGG88357.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomon
Ornithine carbamoyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NEI4_9GAMM
|
|
SCNpilot_expt_300_bf_scaffold_606_2
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(784..984)
|
acetylornithine carbamoyltransferase (EC:2.1.3.9)
Acetylornithine carbamoyltransferase {ECO:0000313|EMBL:AHX12486.1}; EC=2.1.3.9 {ECO:0000313|EMBL:AHX12486.1};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xa
N-acetylornithine carbamoyltransferase n=1 Tax=Dyella ginsengisoli RepID=UPI00034B785C
|
|
SCNpilot_expt_300_bf_scaffold_606_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1379..1903)
|
Putative outer membrane lipoprotein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5U5_9GAMM
Putative outer membrane lipoprotein {ECO:0000313|EMBL:EIL94836.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rho
putative outer membrane lipoprotein
|
|
SCNpilot_expt_300_bf_scaffold_606_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2154..3527
|
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WVL2_9GAMM
rbh
|
|
SCNpilot_expt_300_bf_scaffold_606_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3583..4017
|
SufE protein probably involved in Fe-S center assembly n=1 Tax=Rhodanobacter denitrificans RepID=M4NCI1_9GAMM
SufE protein probably involved in Fe-S center assembly
SufE protein probably involved in Fe-S center assembly {ECO:0000313|EMBL:AGG88354.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobac
|
|
SCNpilot_expt_300_bf_scaffold_606_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4173..5351)
|
RNA polymerase-binding protein DksA n=2 Tax=Rhodanobacter denitrificans RepID=M4NEI0_9GAMM
rbh
RNA polymerase-binding protein DksA
RNA polymerase-binding protein DksA {ECO:0000313|EMBL:AGG88352.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobac
|
|
SCNpilot_expt_300_bf_scaffold_606_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5711..6658)
|
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xantho
GTP cyclohydrolase FolE2 n=1 Tax=Rhodanobacter denitrificans RepID=I4WTM1_9GAMM
rbh
|
|
SCNpilot_expt_300_bf_scaffold_606_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6772..7626)
|
Phytoene/squalene synthetase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5T9_9GAMM
rbh
Phytoene/squalene synthetase {ECO:0000313|EMBL:EIL94830.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobac
phytoene/squalene synthetase
|
|
SCNpilot_expt_300_bf_scaffold_606_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7623..8306)
|
Phosphoglycolate phosphatase {ECO:0000256|SAAS:SAAS00077902}; EC=3.1.3.18 {ECO:0000256|SAAS:SAAS00077902};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanth
Phosphoglycolate phosphatase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5T8_9GAMM
rbh
2-phosphoglycolate phosphatase
|
|
SCNpilot_expt_300_bf_scaffold_606_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8303..9007)
|
3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64)
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTL8_9GAMM
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiqui
|
|
SCNpilot_expt_300_bf_scaffold_606_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9100..9354)
|
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQC7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01669.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_606_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9369..10700)
|
N-ethylammeline chlorohydrolase n=1 Tax=Dyella ginsengisoli RepID=UPI00034D937B
cytosine deaminase-like metal-dependent hydrolase Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
cytosine deaminase-like metal-dependent hydrolase
|
|
SCNpilot_expt_300_bf_scaffold_606_13
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10919..11425)
|
Elongation factor P n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5T4_9GAMM
rbh
translation elongation factor P Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
elongation factor P
|
|
SCNpilot_expt_300_bf_scaffold_606_14
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11515..12525
|
L-lysine 2,3-aminomutase (EC:5.4.3.2)
Lysine-2,3-aminomutase-related protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYI1_9GAMM
rbh
Lysine-2,3-aminomutase-related protein {ECO:0000313|EMBL:EIL92272.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="
|
|
SCNpilot_expt_300_bf_scaffold_606_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12522..14639
|
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5T2_9GAMM
rbh
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EIL94823.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
|
|
SCNpilot_expt_300_bf_scaffold_606_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14778..15173)
|
50S ribosomal protein L19 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5T1_9GAMM
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rho
ribosomal protein L19
|
|
SCNpilot_expt_300_bf_scaffold_606_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15203..15991)
|
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQC1_9GAMM
rbh
tRNA (guanine-N1)-methyltransferase
|
|
SCNpilot_expt_300_bf_scaffold_606_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16025..16540)
|
Ribosome maturation factor RimM n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQC0_9GAMM
rbh
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadacea
16S rRNA processing protein RimM
|
|
SCNpilot_expt_300_bf_scaffold_606_19
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16543..16800)
|
30S ribosomal protein S16 n=1 Tax=Dyella japonica RepID=UPI0002ECBD8C
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica
|
|
SCNpilot_expt_300_bf_scaffold_606_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16996..18435)
|
Signal recognition particle protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQB8_9GAMM
rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanth
signal recognition particle protein
|
|
SCNpilot_expt_300_bf_scaffold_606_21
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18472..19272
|
ABC transporter permease (Fragment) n=1 Tax=Rhodanobacter sp. 115 RepID=I4W516_9GAMM
rbh
ABC transporter permease {ECO:0000313|EMBL:EIL94557.1}; Flags: Fragment;; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sour
ABC-type uncharacterized transport system, permease component
|
|
SCNpilot_expt_300_bf_scaffold_606_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19291..20676)
|
DNA repair protein radA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5S5_9GAMM
rbh
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
DNA repair protein RadA
|
|
SCNpilot_expt_300_bf_scaffold_606_23
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20764..21852)
|
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608};; TaxID=1162282 species="Bacteria; Proteo
Alanine racemase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W518_9GAMM
alanine racemase
|
|
SCNpilot_expt_300_bf_scaffold_606_24
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22011..23405)
|
primary replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQB5_9GAMM
rbh
Replicative DNA helicase {ECO:0000313|EMBL:EIM01657.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
|
|
SCNpilot_expt_300_bf_scaffold_606_25
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23684..23953)
|
50S ribosomal protein L9 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQB4_9GAMM
LSU ribosomal protein L9P Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
LSU ribosomal protein L9P
|
|
SCNpilot_expt_300_bf_scaffold_606_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24463..24888)
|
30S ribosomal protein S6 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5S0_9GAMM
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobac
SSU ribosomal protein S6P
|
|
SCNpilot_expt_300_bf_scaffold_606_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25060..25386)
|
Iron-sulfur cluster assembly accessory protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5R9_9GAMM
Iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:EIL94810.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;"
Iron-sulfur cluster assembly accessory protein
|
|
SCNpilot_expt_300_bf_scaffold_606_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25535..26935
|
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {EC
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5R8_9GAMM
rbh
|
|
SCNpilot_expt_300_bf_scaffold_606_29
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26941..27741
|
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQA9_9GAMM
rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM01651.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
Maltose operon periplasmic protein precursor (MalM)
|
|
SCNpilot_expt_300_bf_scaffold_606_30
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27738..28049
|
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQA8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01650.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
hypothetical protein
|