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SCNpilot_expt_300_bf_scaffold_681

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_681_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..263)
DNA (261bp) protein (87aa)
Uncharacterized protein involved in tolerance to divalent cations n=1 Tax=Rhodanobacter denitrificans RepID=M4NIA0_9GAMM
uncharacterized protein involved in tolerance to divalent cations Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
uncharacterized protein involved in tolerance to divalent cations
SCNpilot_expt_300_bf_scaffold_681_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

497..790
DNA (294bp) protein (98aa)
10 kDa chaperonin n=1 Tax=Rhodanobacter sp. 115 RepID=I4W463_9GAMM
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1162282 spec
molecular chaperone GroES
SCNpilot_expt_300_bf_scaffold_681_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1009..2499
DNA (1491bp) protein (497aa)
60 kDa chaperonin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3C1_9GAMM
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1163407 spec
chaperonin GroL
SCNpilot_expt_300_bf_scaffold_681_4
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2634..3611)
DNA (978bp) protein (326aa)
Putative uncharacterized protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TVS0_ACIAC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM35058.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (s
SCNpilot_expt_300_bf_scaffold_681_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3704..5605)
DNA (1902bp) protein (634aa)
Phosphoglycerol transferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHM3_9GAMM rbh
phosphoglycerol transferase family protein, alkaline phosphatase superfamily
Phosphoglycerol transferase family protein, alkaline phosphatase superfamily {ECO:0000313|EMBL:AGG87525.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xant
SCNpilot_expt_300_bf_scaffold_681_6
unknown

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5824..6630
DNA (807bp) protein (269aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_681_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6946..8502
DNA (1557bp) protein (519aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3B8_9GAMM
glutamine synthetase adenylyltransferase
SCNpilot_expt_300_bf_scaffold_681_8

Not on your lists

8662..11679
DNA (3018bp) protein (1006aa)
Thiazole biosynthesis (Fragment) n=2 Tax=mine drainage metagenome RepID=T0ZA60_9ZZZZ rbh
Thiazole biosynthesis {ECO:0000313|EMBL:EQD41938.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
two-component system sensor-response regulator hybrid protein
SCNpilot_expt_300_bf_scaffold_681_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11752..12768)
DNA (1017bp) protein (339aa)
Putative nucleoside-diphosphate-sugar epimerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHM5_9GAMM rbh
putative nucleoside-diphosphate-sugar epimerase
Putative nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AGG87527.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;"
SCNpilot_expt_300_bf_scaffold_681_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12950..13543
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3B6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93957.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
SCNpilot_expt_300_bf_scaffold_681_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13623..14885)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHM8_9GAMM rbh
Na+/proline symporter
Na+/proline symporter {ECO:0000313|EMBL:AGG87530.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source=
SCNpilot_expt_300_bf_scaffold_681_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15082..15291
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDV9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97650.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
hypothetical protein
SCNpilot_expt_300_bf_scaffold_681_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15346..16503
DNA (1158bp) protein (386aa)
Glycosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NCN1_9GAMM rbh
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AGG87532.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
SCNpilot_expt_300_bf_scaffold_681_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16560..17891
DNA (1332bp) protein (444aa)
Lipid A core--O-antigen ligase-like protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHN1_9GAMM rbh
lipid A core-O-antigen ligase-like enyme
Lipid A core-O-antigen ligase-like enyme {ECO:0000313|EMBL:AGG87533.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhoda
SCNpilot_expt_300_bf_scaffold_681_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17881..18633
DNA (753bp) protein (251aa)
Glycosyl transferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHN2_9GAMM rbh
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:AGG87534.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denit
SCNpilot_expt_300_bf_scaffold_681_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18718..19653)
DNA (936bp) protein (312aa)
Lipid A biosynthesis lauroyltransferase {ECO:0000256|HAMAP-Rule:MF_01942}; EC=2.3.1.241 {ECO:0000256|HAMAP-Rule:MF_01942};; Kdo(2)-lipid IV(A) lauroyltransferase {ECO:0000256|HAMAP-Rule:MF_01942}; Tax
Lipid A biosynthesis lauroyl acyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDV3_9GAMM rbh
lipid A biosynthesis lauroyl/palmitoleoyl acyltransferase
SCNpilot_expt_300_bf_scaffold_681_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19730..20977
DNA (1248bp) protein (416aa)
3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHN6_9GAMM
3-deoxy-D-manno-octulosonic-acid transferase
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:AGG87538.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sou
SCNpilot_expt_300_bf_scaffold_681_18
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20950..22368)
DNA (1419bp) protein (473aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034CAA07 rbh
Type I secretion protein TolC {ECO:0000313|EMBL:KJV26863.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter
type I secretion protein TolC
SCNpilot_expt_300_bf_scaffold_681_19
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22408..23067)
DNA (660bp) protein (220aa)
Protein-L-isoaspartate carboxylmethyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3A7_9GAMM
protein-L-isoaspartate carboxylmethyltransferase Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
protein-L-isoaspartate carboxylmethyltransferase
SCNpilot_expt_300_bf_scaffold_681_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23333..23944
DNA (612bp) protein (204aa)
Transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3A6_9GAMM
Transcriptional regulator {ECO:0000313|EMBL:EIL93947.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
transcriptional regulator
SCNpilot_expt_300_bf_scaffold_681_21
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24055..24669
DNA (615bp) protein (205aa)
Bacterioferritin (Cytochrome b1) n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDG4_9GAMM rbh
Bacterioferritin (Cytochrome b1) {ECO:0000313|EMBL:EIL97505.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodan
bacterioferritin (cytochrome b1)
SCNpilot_expt_300_bf_scaffold_681_22
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24691..25707)
DNA (1017bp) protein (339aa)
Zinc-binding alcohol dehydrogenase family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDU7_9GAMM rbh
Zinc-binding alcohol dehydrogenase family protein {ECO:0000313|EMBL:EIL97638.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.
zinc-binding alcohol dehydrogenase family protein
SCNpilot_expt_300_bf_scaffold_681_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25921..26940
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NAM6_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87544.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
SCNpilot_expt_300_bf_scaffold_681_24
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27001..27546)
DNA (546bp) protein (182aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1163408 species="Ba
Inorganic pyrophosphatase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VS02_9GAMM rbh
inorganic pyrophosphatase
SCNpilot_expt_300_bf_scaffold_681_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27618..28472)
DNA (855bp) protein (285aa)
2OG-Fe(II) oxygenase superfamily enzyme n=1 Tax=Rhodanobacter denitrificans RepID=I4WHP4_9GAMM rbh
2OG-Fe(II) oxygenase superfamily enzyme
2OG-Fe(II) oxygenase superfamily enzyme {ECO:0000313|EMBL:AGG87546.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="
SCNpilot_expt_300_bf_scaffold_681_26
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28557..30695)
DNA (2139bp) protein (713aa)
Prolyl oligopeptidase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VS00_9GAMM rbh
Prolyl oligopeptidase {ECO:0000313|EMBL:EIL89991.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter ful
serine protease, S9A family peptidase
SCNpilot_expt_300_bf_scaffold_681_27
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30838..31650)
DNA (813bp) protein (271aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDU2_9GAMM
vacuolar-type H(+)-translocating pyrophosphatase
Displaying 27 items

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