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SCNpilot_expt_300_bf_scaffold_834

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Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_834_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..141)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L1T4_FRAAD
ISXo8 transposase Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
transposase
SCNpilot_expt_300_bf_scaffold_834_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

736..1665
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTQ3_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL90594.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
EDD domain protein, DegV family
SCNpilot_expt_300_bf_scaffold_834_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1685..2479)
DNA (795bp) protein (265aa)
Tropinone reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWB3_9GAMM
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90561.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter de
SCNpilot_expt_300_bf_scaffold_834_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2589..2795
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWB4_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90562.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
SCNpilot_expt_300_bf_scaffold_834_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2806..4671)
DNA (1866bp) protein (622aa)
Protease 4 {ECO:0000256|PIRNR:PIRNR001217}; EC=3.4.21.- {ECO:0000256|PIRNR:PIRNR001217};; Endopeptidase IV {ECO:0000256|PIRNR:PIRNR001217}; Protease IV {ECO:0000256|PIRNR:PIRNR001217}; Signal peptide
Signal peptide peptidase SppA, 67K type n=1 Tax=Rhodanobacter denitrificans RepID=I4WWB5_9GAMM
signal peptide peptidase SppA, 67K type
SCNpilot_expt_300_bf_scaffold_834_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4689..6092)
DNA (1404bp) protein (468aa)
Putative efflux protein, MATE family n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE29_9GAMM rbh
Putative efflux protein, MATE family {ECO:0000313|EMBL:EIL97720.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rh
putative efflux protein, MATE family
SCNpilot_expt_300_bf_scaffold_834_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6199..7392
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTQ8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90599.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
Protein of unknown function (DUF3667)
SCNpilot_expt_300_bf_scaffold_834_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7767..10052
DNA (2286bp) protein (762aa)
Primosome assembly protein PriA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE31_9GAMM rbh
replication restart DNA helicase PriA Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
replication restart DNA helicase PriA
SCNpilot_expt_300_bf_scaffold_834_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10650..11084)
DNA (435bp) protein (145aa)
Sec-independent protein translocase protein TatB n=1 Tax=Rhodanobacter sp. 115 RepID=I4VL15_9GAMM
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales
twin arginine-targeting protein translocase TatB
SCNpilot_expt_300_bf_scaffold_834_10
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11109..11372)
DNA (264bp) protein (88aa)
Sec-independent protein translocase protein TatA n=1 Tax=Rhodanobacter denitrificans RepID=I4WN20_9GAMM
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobact
twin arginine-targeting protein translocase, TatA/E family
SCNpilot_expt_300_bf_scaffold_834_11
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11429..12118)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTR3_9GAMM rbh
hypothetical protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_834_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12227..13282
DNA (1056bp) protein (352aa)
ferrochelatase (EC:4.99.1.1)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF
Ferrochelatase n=1 Tax=Rhodanobacter denitrificans RepID=I4WX65_9GAMM rbh
SCNpilot_expt_300_bf_scaffold_834_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13466..14059
DNA (594bp) protein (198aa)
Alpha/beta hydrolase fold domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX66_9GAMM
putative hydrolase or acyltransferase of alpha/beta superfamily
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:AGG90572.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
SCNpilot_expt_300_bf_scaffold_834_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14148..15854)
DNA (1707bp) protein (569aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTR6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL90607.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
Peptidase family M49
SCNpilot_expt_300_bf_scaffold_834_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15995..17335
DNA (1341bp) protein (447aa)
Drug:H+ antiporter-1 family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTR7_9GAMM rbh
Drug:H+ antiporter-1 family protein {ECO:0000313|EMBL:EIL90608.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rho
arabinose efflux permease family protein
SCNpilot_expt_300_bf_scaffold_834_16
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17332..17838
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPZ6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89287.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
hypothetical protein
SCNpilot_expt_300_bf_scaffold_834_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18062..18286
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX70_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90576.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter de
SCNpilot_expt_300_bf_scaffold_834_18
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18300..19352)
DNA (1053bp) protein (351aa)
Uncharacterized protein Tax=RBG_16_Gallionellales_57_15_curated
Uncharacterized protein id=12551160 bin=BDI species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=BDI organism_group=Betaproteobacteria
SCNpilot_expt_300_bf_scaffold_834_19
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19403..19558)
DNA (156bp) protein (52aa)
id=12551159 Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
id=12551159 bin=BDI tax=BDI organism_group=Betaproteobacteria
SCNpilot_expt_300_bf_scaffold_834_20
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19663..20007
DNA (345bp) protein (115aa)
FAD-dependent dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTD2_9GAMM
FAD-dependent dehydrogenase Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
FAD-dependent dehydrogenase
SCNpilot_expt_300_bf_scaffold_834_21
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20083..20745
DNA (663bp) protein (221aa)
DSBA oxidoreductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WX72_9GAMM rbh
putative dithiol-disulfide isomerase involved in polyketide biosynthesis Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
putative dithiol-disulfide isomerase involved in polyketide biosynthesis
SCNpilot_expt_300_bf_scaffold_834_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20756..23665)
DNA (2910bp) protein (970aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NI59_9GAMM rbh
diguanylate cyclase (GGDEF) domain-containing protein
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AGG90579.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomona
SCNpilot_expt_300_bf_scaffold_834_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23881..25983
DNA (2103bp) protein (701aa)
ATP-dependent DNA helicase DinG n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTS2_9GAMM rbh
ATP-dependent DNA helicase DinG {ECO:0000313|EMBL:EIL90613.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodano
DNA helicase, Rad3
SCNpilot_expt_300_bf_scaffold_834_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25980..26465
DNA (486bp) protein (162aa)
Histidine utilization protein HutD n=1 Tax=Rhodanobacter denitrificans RepID=I4WX75_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90581.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter de
SCNpilot_expt_300_bf_scaffold_834_25
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26539..27117
DNA (579bp) protein (193aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NKH9_9GAMM
hypothetical protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_834_26
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27208..27405
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTC0_9GAMM
hypothetical protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_834_27
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27419..28015
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX78_9GAMM
putative S-adenosylmethionine-dependent methyltransferase Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
putative S-adenosylmethionine-dependent methyltransferase
SCNpilot_expt_300_bf_scaffold_834_28
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28053..28454
DNA (402bp) protein (134aa)
UPF0225 protein UUA_01469 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTB7_9GAMM
UPF0225 protein UUA_01469 {ECO:0000256|HAMAP-Rule:MF_00612}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
hypothetical protein
SCNpilot_expt_300_bf_scaffold_834_29
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28458..30137)
DNA (1680bp) protein (560aa)
DNA ligase B n=1 Tax=Rhodanobacter denitrificans RepID=I4WX80_9GAMM rbh
NAD-dependent DNA ligase Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
NAD-dependent DNA ligase
SCNpilot_expt_300_bf_scaffold_834_30
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30238..31011)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX81_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90587.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter de
Displaying items 1-30 of 67 in total

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