ggKbase home page

SCNpilot_expt_300_bf_scaffold_1041_2

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 12 / 38
Location: 1368..2945

Top 3 Functional Annotations

Value Algorithm Source
DNA/RNA helicase, superfamily II (EC:5.99.1.-) similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 532.0
  • Bit_score: 963
  • Evalue 3.20e-278
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=666685 species similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 532.0
  • Bit_score: 963
  • Evalue 1.60e-277
ATP-dependent RNA helicase DeaD n=1 Tax=Rhodanobacter denitrificans RepID=I4WTI2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 91.7
  • Coverage: 532.0
  • Bit_score: 962
  • Evalue 1.90e-277
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1578
GTGGCCGAGGCGTTCCAGACCTATGCCGCGCACGTCCCCGGCTTCCAGGTGCTGCCGATCTACGGCGGCCAGAGCTACGGCCCGCAACTGCATTCGCTCAAGCGCGGCGTGCACGTCGTGGTCGGCACGCCCGGCCGCGTGATCGACCATCTGGACAAGGGCACGCTGGACCTCTCGGAGCTGAAATTCCTGGTGCTCGACGAGGCTGACGAGATGCTGCGCATGGGCTTCATCGACGACGTCGAGAAGGTGCTGCAGGCCACCCCGCCCGGGCGCCAGGTCGCGCTGTTCTCGGCGACCATGCCGGTGCCGATCCGCAAGATCGCGCAGCGGCATCTGAAGGACCCGGTCGAAGTCACCATCAAGTCCTCGACCACGACCGCGGCGAACATCCACCAGCGCTACTGGTTCGTCAGCGGCATGCACAAGCTCGATGCCTTGACCCGCATCCTCGAGGCCGAGCCGTTCGACGCGATGATCATCTTCGCGCGCACCAAGCAGGCCACCGAGGAGCTGGCCGAGAAGCTGCAGGCGCGCGGCCTGGCCGCCGCCGCGATCAACGGCGACATCGCCCAGGCACAGCGCGAGCGGGTGATCCAGCAGCTGAAGGACGGCAAGCTCGACATCCTGGTCGCCACCGACGTGGCCGCGCGCGGGCTGGACGTGGAGCGGATCAGCCACGTGCTGAACTACGACATCCCGTACGACACCGAAAGCTACGTGCACCGCATCGGCCGCACCGGCCGCGCCGGGCGCAGCGGCGAGGCGATCCTGTTCGTCAGCCCGCGCGAACGCGGCATGCTGCACGCGATCGAGCGCGCCACCCGCCAGCCGATCGAGCAGATGCAGTTGCCGTCGGTCGAGGTGGTCAATGATGTACGCATCGGCAAGTTCAAGCAGCGCATCAGCGACATGCTGGCGCAGGGCGACCTCGGCCAGTTCCAGCAGCTGATCGAGCAGTACGAGCAGGAACACAACGTGCCGGCGGTCGAGATCGCCGCCGCGCTGGCGCGCATCGCCCAGGGCGACCAACCGCTGCTGCTGGCGCCGCCGCCCAAGCGCGAGAAGTACGAGCCGGCCACGCGCGAACACAAGCCGCGCGAGCGCGACGGTGCCAGCCGCACGGCCCGCGAGCACAAGCCGCGCAGTCACGAGGGCGCGACACCGCGCGAGTTCGCGGCGCGCCCGCTGCGCGCGCATGCCACCGAACAAGGCAAGCGCACCTACCGCATCGAAGTCGGCCACGAGCATGGCGTCAAGCCGGGCAACATCATCGGCGCGATCGCCAACGAGGCAGGACTGGACAGCCAGTACATCGGCCGCCTCAGCATCCGCGACCACTACAGCCTGATCGACCTGCCCGACGGCATGCCGAAGGAAATCTTCGAGCACCTGAAGAAGGTGTGGGTGGTGCAGCAGCAGTTGCGCATCCACGAGTGGGACGGCAACGACACCGGCTCAGCGGCACCGCCCGCACACCACGCCCCCAGCCACAAGCCGGGCGGCCACAAACCCGGCGGATTCAGGCCAGGCGGCGTCAAGCCACGCACGGGCAGCAAGCCACCACCGCGCAAATAA
PROTEIN sequence
Length: 526
VAEAFQTYAAHVPGFQVLPIYGGQSYGPQLHSLKRGVHVVVGTPGRVIDHLDKGTLDLSELKFLVLDEADEMLRMGFIDDVEKVLQATPPGRQVALFSATMPVPIRKIAQRHLKDPVEVTIKSSTTTAANIHQRYWFVSGMHKLDALTRILEAEPFDAMIIFARTKQATEELAEKLQARGLAAAAINGDIAQAQRERVIQQLKDGKLDILVATDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRSGEAILFVSPRERGMLHAIERATRQPIEQMQLPSVEVVNDVRIGKFKQRISDMLAQGDLGQFQQLIEQYEQEHNVPAVEIAAALARIAQGDQPLLLAPPPKREKYEPATREHKPRERDGASRTAREHKPRSHEGATPREFAARPLRAHATEQGKRTYRIEVGHEHGVKPGNIIGAIANEAGLDSQYIGRLSIRDHYSLIDLPDGMPKEIFEHLKKVWVVQQQLRIHEWDGNDTGSAAPPAHHAPSHKPGGHKPGGFRPGGVKPRTGSKPPPRK*